Abd El Wahed, Ahmed

[["dc.bibliographiccitation.journal","Frontiers in Veterinary Science"],["dc.bibliographiccitation.volume","7"],["dc.contributor.author","Roller, Marco"],["dc.contributor.author","Hansen, Sören"],["dc.contributor.author","Knauf-Witzens, Tobias"],["dc.contributor.author","Oelemann, Walter M. R."],["dc.contributor.author","Czerny, Claus-Peter"],["dc.contributor.author","Abd El Wahed, Ahmed"],["dc.contributor.author","Goethe, Ralph"],["dc.date.accessioned","2021-04-14T08:30:11Z"],["dc.date.available","2021-04-14T08:30:11Z"],["dc.date.issued","2020"],["dc.description.abstract","Mycobacterium avium subspecies paratuberculosis (MAP) is the causative agent of paratuberculosis (ParaTB or Johne's disease), a contagious, chronic and typically fatal enteric disease of domestic and non-domestic ruminants. Clinically affected animals present wasting and emaciation. However, MAP can also infect non-ruminant animal species with less specific signs. Zoological gardens harbor various populations of diverse animal species, which are managed on limited space at higher than natural densities. Hence, they are predisposed to endemic trans-species pathogen distribution. Information about the incidence and prevalence of MAP infections in zoological gardens and the resulting potential threat to exotic and endangered species are rare. Due to unclear pathogenesis, chronicity of disease as well as the unknown cross-species accuracy of diagnostic tests, diagnosis and surveillance of MAP and ParaTB is challenging. Differentiation between uninfected shedders of ingested bacteria; subclinically infected individuals; and preclinically diseased animals, which may subsequently develop clinical signs after long incubation periods, is crucial for the interpretation of positive test results in animals and the resulting consequences in their management. This review summarizes published data from the current literature on occurrence of MAP infection and disease in susceptible and affected zoo animal species as well as the applied diagnostic methods and measures. Clinical signs indicative for ParaTB, pathological findings and reports on detection, transmission and epidemiology in zoo animals are included. Furthermore, case reports were re-evaluated for incorporation into accepted consistent terminologies and case definitions."],["dc.identifier.doi","10.3389/fvets.2020.572724"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/83135"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-399"],["dc.publisher","Frontiers Media S.A."],["dc.relation.eissn","2297-1769"],["dc.rights","http://creativecommons.org/licenses/by/4.0/"],["dc.title","Mycobacterium avium Subspecies paratuberculosis Infection in Zoo Animals: A Review of Susceptibility and Disease Process"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","104764"],["dc.bibliographiccitation.journal","Data in Brief"],["dc.bibliographiccitation.volume","27"],["dc.contributor.author","Hansen, Sören"],["dc.contributor.author","Pessôa, Rodrigo"],["dc.contributor.author","Nascimento, Andrezza"],["dc.contributor.author","El-Tholoth, Mohamed"],["dc.contributor.author","Abd El Wahed, Ahmed"],["dc.contributor.author","Sanabani, Sabri S."],["dc.date.accessioned","2020-12-10T14:23:28Z"],["dc.date.available","2020-12-10T14:23:28Z"],["dc.date.issued","2019"],["dc.identifier.doi","10.1016/j.dib.2019.104764"],["dc.identifier.issn","2352-3409"],["dc.identifier.purl","https://resolver.sub.uni-goettingen.de/purl?gs-1/16736"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/71937"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-354"],["dc.notes.intern","Merged from goescholar"],["dc.rights","CC BY 4.0"],["dc.rights.uri","https://creativecommons.org/licenses/by/4.0"],["dc.title","Dataset of the microbiome composition in skin lesions caused by lumpy skin disease virus via 16s rRNA massive parallel sequencing"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.version","published_version"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","351"],["dc.bibliographiccitation.issue","4"],["dc.bibliographiccitation.journal","Vaccines"],["dc.bibliographiccitation.volume","9"],["dc.contributor.author","Eltom, Kamal H."],["dc.contributor.author","Althoff, Anna Christina"],["dc.contributor.author","Hansen, Sören"],["dc.contributor.author","Böhlken-Fascher, Susanne"],["dc.contributor.author","Yousif, Ausama"],["dc.contributor.author","El-Sheikh, Hussein A."],["dc.contributor.author","ElWakeel, Ahmed A."],["dc.contributor.author","Elgamal, Mahmoud A."],["dc.contributor.author","Mossa, Hadeer M."],["dc.contributor.author","Abd El Wahed, Ahmed"],["dc.contributor.author","Aboul-Soud, Emad A."],["dc.contributor.author","Wolff, Janika"],["dc.contributor.author","Korthase, Christian"],["dc.contributor.author","Hoffmann, Bernd"],["dc.contributor.author","Adam, Nabawia M."],["dc.contributor.author","Abdelaziz, Sanaa A."],["dc.contributor.author","Shalaby, Mohamed A."],["dc.date.accessioned","2021-06-01T09:42:43Z"],["dc.date.available","2021-06-01T09:42:43Z"],["dc.date.issued","2021"],["dc.description.abstract","The genus capripoxvirus (CaPV), family Poxviridae, includes three virus species: goatpox virus (GPV), sheeppox virus (SPV) and lumpy skin disease virus (LSDV). CaPV causes disease outbreaks with consequent economic losses in Africa and the Middle East. LSDV has recently spread to Southeast Europe. As CaPVs share 96–97% genetic similarity along the length of the entire genome and are difficult to distinguish using serological assays, simple, reliable and fast methods for diagnosis and species differentiation are crucial in cases of disease outbreak. The present study aimed to develop a field-applicable CaPV differentiation method. Nanopore technology was used for whole genome sequencing. A local database of complete CaPV genomes and partial sequences of three genes (RPO30, P32 and GPCR) was established for offline Basic Local Alignment Search Tool (BLAST). Specificities of 98.04% in whole genome and 97.86% in RPO30 gene runs were obtained among the three virus species, while other databases were less specific. The total run time was shortened to approximately 2 h. Functionality of the developed procedure was proved by samples with high host background sequences. Reliable differentiation options for the quality and capacity of hardware, and sample quality of suspected cases, were derived from these findings. The whole workflow can be performed rapidly with a mobile suitcase laboratory and mini-computer, allowing application at the point-of-need with limited resource settings."],["dc.description.sponsorship","Open-Access-Publikationsfonds 2021"],["dc.identifier.doi","10.3390/vaccines9040351"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/85330"],["dc.language.iso","en"],["dc.notes.intern","DOI-Import GROB-425"],["dc.relation.eissn","2076-393X"],["dc.relation.orgunit","Abteilung Mikrobiologie und Tierhygiene"],["dc.rights","CC BY 4.0"],["dc.title","Differentiation of Capripox Viruses by Nanopore Sequencing"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.subtype","original_ja"],["dc.type.version","published_version"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.issue","1"],["dc.bibliographiccitation.journal","Parasites & Vectors"],["dc.bibliographiccitation.volume","12"],["dc.contributor.author","Khan, Md Anik Ashfaq"],["dc.contributor.author","Chowdhury, Rajashree"],["dc.contributor.author","Nath, Rupen"],["dc.contributor.author","Hansen, Sören"],["dc.contributor.author","Nath, Progga"],["dc.contributor.author","Maruf, Shomik"],["dc.contributor.author","Abd El Wahed, Ahmed"],["dc.contributor.author","Mondal, Dinesh"],["dc.date.accessioned","2020-12-10T18:39:05Z"],["dc.date.available","2020-12-10T18:39:05Z"],["dc.date.issued","2019"],["dc.identifier.doi","10.1186/s13071-019-3771-6"],["dc.identifier.eissn","1756-3305"],["dc.identifier.purl","https://resolver.sub.uni-goettingen.de/purl?gs-1/16641"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/77539"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-354"],["dc.notes.intern","Merged from goescholar"],["dc.rights","CC BY 4.0"],["dc.rights.uri","https://creativecommons.org/licenses/by/4.0/"],["dc.title","Imported cutaneous leishmaniasis: molecular investigation unveils Leishmania major in Bangladesh"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.version","published_version"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","1007"],["dc.bibliographiccitation.issue","7"],["dc.bibliographiccitation.journal","Microorganisms"],["dc.bibliographiccitation.volume","8"],["dc.contributor.author","Okuni, Julius Boniface"],["dc.contributor.author","Hansen, Sören"],["dc.contributor.author","Eltom, Kamal H."],["dc.contributor.author","Eltayeb, ElSagad"],["dc.contributor.author","Amanzada, Ahmad"],["dc.contributor.author","Omega, Joseph Amesa"],["dc.contributor.author","Czerny, Claus Peter"],["dc.contributor.author","Abd El Wahed, Ahmed"],["dc.contributor.author","Ojok, Lonzy"],["dc.date.accessioned","2021-04-14T08:25:03Z"],["dc.date.available","2021-04-14T08:25:03Z"],["dc.date.issued","2020"],["dc.identifier.doi","10.3390/microorganisms8071007"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/81506"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-399"],["dc.relation.eissn","2076-2607"],["dc.title","Paratuberculosis: A Potential Zoonosis and a Neglected Disease in Africa"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","23"],["dc.bibliographiccitation.journal","Journal of Clinical Virology"],["dc.bibliographiccitation.lastpage","27"],["dc.bibliographiccitation.volume","106"],["dc.contributor.author","Hansen, Sören"],["dc.contributor.author","Faye, Oumar"],["dc.contributor.author","Sanabani, Sabri S."],["dc.contributor.author","Faye, Martin"],["dc.contributor.author","Böhlken-Fascher, Susanne"],["dc.contributor.author","Faye, Ousmane"],["dc.contributor.author","Sall, Amadou A."],["dc.contributor.author","Bekaert, Michaël"],["dc.contributor.author","Weidmann, Manfred"],["dc.contributor.author","Czerny, Claus-Peter"],["dc.contributor.author","Abd El Wahed, Ahmed"],["dc.date.accessioned","2020-12-10T14:25:03Z"],["dc.date.available","2020-12-10T14:25:03Z"],["dc.date.issued","2018"],["dc.identifier.doi","10.1016/j.jcv.2018.07.001"],["dc.identifier.issn","1386-6532"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/72419"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-354"],["dc.title","Combination random isothermal amplification and nanopore sequencing for rapid identification of the causative agent of an outbreak"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","117"],["dc.bibliographiccitation.issue","3"],["dc.bibliographiccitation.journal","Veterinary Sciences"],["dc.bibliographiccitation.volume","7"],["dc.contributor.author","Roller, Marco"],["dc.contributor.author","Hansen, Sören"],["dc.contributor.author","Böhlken-Fascher, Susanne"],["dc.contributor.author","Knauf-Witzens, Tobias"],["dc.contributor.author","Czerny, Claus-Peter"],["dc.contributor.author","Goethe, Ralph"],["dc.contributor.author","Abd El Wahed, Ahmed"],["dc.date.accessioned","2021-04-14T08:32:27Z"],["dc.date.available","2021-04-14T08:32:27Z"],["dc.date.issued","2020"],["dc.identifier.doi","10.3390/vetsci7030117"],["dc.identifier.purl","https://resolver.sub.uni-goettingen.de/purl?gs-1/17560"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/83927"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-399"],["dc.notes.intern","Merged from goescholar"],["dc.publisher","MDPI"],["dc.relation.eissn","2306-7381"],["dc.rights","CC BY 4.0"],["dc.rights.uri","http://creativecommons.org/licenses/by/4.0/"],["dc.title","Molecular and Serological Footprints of Mycobacterium avium Subspecies Infections in Zoo Animals"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.version","published_version"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","50"],["dc.bibliographiccitation.journal","Journal of Virological Methods"],["dc.bibliographiccitation.lastpage","53"],["dc.bibliographiccitation.volume","263"],["dc.contributor.author","Hansen, Sören"],["dc.contributor.author","Dill, Veronika"],["dc.contributor.author","Shalaby, Mohamed A."],["dc.contributor.author","Eschbaumer, Michael"],["dc.contributor.author","Böhlken-Fascher, Susanne"],["dc.contributor.author","Hoffmann, Bernd"],["dc.contributor.author","Czerny, Claus-Peter"],["dc.contributor.author","Abd El Wahed, Ahmed"],["dc.date.accessioned","2020-12-10T15:20:09Z"],["dc.date.available","2020-12-10T15:20:09Z"],["dc.date.issued","2019"],["dc.identifier.doi","10.1016/j.jviromet.2018.10.020"],["dc.identifier.issn","0166-0934"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/72571"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-354"],["dc.title","Serotyping of foot-and-mouth disease virus using oxford nanopore sequencing"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","151"],["dc.bibliographiccitation.issue","4"],["dc.bibliographiccitation.journal","Tropical Medicine and Infectious Disease"],["dc.bibliographiccitation.volume","5"],["dc.contributor.author","Hansen, Sören"],["dc.contributor.author","Abd El Wahed, Ahmed"],["dc.date.accessioned","2021-06-01T10:48:49Z"],["dc.date.available","2021-06-01T10:48:49Z"],["dc.date.issued","2020"],["dc.description.abstract","In the recent years, the progress of international trade and travel has led to an increased risk of emerging infections. Around 75 percent of the pathogens causing these infections are of animal origin. Point-of-care tests (POCT) and point-of-need tests (PONT) have been established in order to directly provide accurate and rapid diagnostics at field level, the patient bed-side or at the site of outbreaks. These assays can help physicians and decision makers to take the right action without delay. Typically, POCT and PONT rely on genomic identification of pathogens or track their immunological fingerprint. Recently, protocols for metagenomic diagnostics in the field have been developed. In this review, we give an overview of the latest developments in portable diagnostic methods. In addition, four mobile platforms for the implementation of these techniques at point-of-care and point-of-need are described. These approaches can provide reliable diagnostics and surveillance, especially in low resource settings as well as at the level of one health."],["dc.identifier.doi","10.3390/tropicalmed5040151"],["dc.identifier.purl","https://resolver.sub.uni-goettingen.de/purl?gs-1/17583"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/86063"],["dc.language.iso","en"],["dc.notes.intern","DOI-Import GROB-425"],["dc.notes.intern","Merged from goescholar"],["dc.relation.eissn","2414-6366"],["dc.rights","CC BY 4.0"],["dc.rights.uri","http://creativecommons.org/licenses/by/4.0/"],["dc.title","Point-Of-Care or Point-Of-Need Diagnostic Tests: Time to Change Outbreak Investigation and Pathogen Detection"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.version","submitted_version"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","123"],["dc.bibliographiccitation.lastpage","136"],["dc.bibliographiccitation.seriesnr","2142"],["dc.contributor.author","Hansen, Sören"],["dc.contributor.author","Faye, Oumar"],["dc.contributor.author","Sanabani, Sabri S."],["dc.contributor.author","Faye, Martin"],["dc.contributor.author","Böhlken-Fascher, Susanne"],["dc.contributor.author","Faye, Ousmane"],["dc.contributor.author","Sall, Amadou Alpha"],["dc.contributor.author","Bekaert, Michaël"],["dc.contributor.author","Weidmann, Manfred"],["dc.contributor.author","Czerny, Claus-Peter"],["dc.contributor.author","Abd El Wahed, Ahmed"],["dc.contributor.editor","Kobinger, Gary"],["dc.contributor.editor","Racine, Trina"],["dc.date.accessioned","2021-06-02T10:44:21Z"],["dc.date.available","2021-06-02T10:44:21Z"],["dc.date.issued","2020"],["dc.identifier.doi","10.1007/978-1-0716-0581-3_11"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/87005"],["dc.notes.intern","DOI-Import GROB-425"],["dc.publisher","Springer US"],["dc.publisher.place","New York, NY"],["dc.relation.crisseries","Methods in Molecular Biology"],["dc.relation.eisbn","978-1-0716-0581-3"],["dc.relation.isbn","978-1-0716-0580-6"],["dc.relation.ispartof","Methods in Molecular Biology"],["dc.relation.ispartof","Zika Virus : Methods and Protocols"],["dc.relation.ispartofseries","Methods in Molecular Biology; 2142"],["dc.title","Zika Virus Amplification Using Strand Displacement Isothermal Method and Sequencing Using Nanopore Technology"],["dc.type","book_chapter"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]