Finkeldey, Reiner

[["dc.bibliographiccitation.firstpage","116"],["dc.bibliographiccitation.issue","1"],["dc.bibliographiccitation.journal","Plant Biology"],["dc.bibliographiccitation.lastpage","126"],["dc.bibliographiccitation.volume","9"],["dc.contributor.author","Curtu, Alexandru Lucian"],["dc.contributor.author","Gailing, Oliver"],["dc.contributor.author","Leinemann, Ludger"],["dc.contributor.author","Finkeldey, Reiner"],["dc.date.accessioned","2018-11-07T11:07:27Z"],["dc.date.accessioned","2020-05-13T12:20:00Z"],["dc.date.available","2018-11-07T11:07:27Z"],["dc.date.available","2020-05-13T12:20:00Z"],["dc.date.issued","2007"],["dc.description.abstract","Chloroplast DNA and two categories of nuclear markers - isozymes and microsatellites - were used to examine a very rich natural community of oaks (Quercus spp.) situated in west-central Romania. The community consists of five oak species: Q. robur, Q. petraea, Q. pubescens, and Q. frainetto - that are closely related -, and Q. cerris. A total of five chloroplast haplotypes was identified. Q. cerris was fixed for a single haplotype. The other four species shared the two most common haplotypes. One haplotype was confined to Q. robur and a very rare one was restricted to Q. petraea. Both types of nuclear markers revealed a larger genetic variation for Q. pubescens and Q. petraea than for Q. frainetto and Q. robur, although the differences between species are in most cases not significant. At the nuclear level, Q. cerris could be clearly separated from the other four oak species confirming the taxonomic classification. Regardless of the estimate used, the levels of polymorphism revealed by microsatellites were much higher than those based on isozymes. For the four closely related species the overall genetic differentiation was significant at both categories of nuclear markers. Several loci, such as Acp-C for isozymes, and ssrQpZAG36 and ssrQrZAG96 for microsatellites were very useful to discriminate among species. However, the level of differentiation varied markedly between pairs of species. The genetic affinities among the species may reflect different phylogenetic distances and/or different rates of recurrent gene flow at this site."],["dc.identifier.doi","10.1055/s-2006-924542"],["dc.identifier.isi","000243988100014"],["dc.identifier.pmid","17048143"],["dc.identifier.scopus","2-s2.0-33846856208"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/52565"],["dc.identifier.url","http://www.scopus.com/inward/record.url?eid=2-s2.0-33846856208&partnerID=MN8TOARS"],["dc.language.iso","en"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.relation.issn","1435-8603"],["dc.title","Genetic variation and differentiation within a natural community of five oak species (Quercus spp.)"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","742"],["dc.bibliographiccitation.issue","6"],["dc.bibliographiccitation.journal","Trees"],["dc.bibliographiccitation.lastpage","747"],["dc.bibliographiccitation.volume","19"],["dc.contributor.author","Holderegger, R."],["dc.contributor.author","Angelone, S."],["dc.contributor.author","Brodbeck, S."],["dc.contributor.author","Csencsics, D."],["dc.contributor.author","Gugerli, F."],["dc.contributor.author","Hoebee, Susan E."],["dc.contributor.author","Finkeldey, Reiner"],["dc.date.accessioned","2018-11-07T10:54:52Z"],["dc.date.available","2018-11-07T10:54:52Z"],["dc.date.issued","2005"],["dc.description.abstract","European Black Poplar (Populus nigra) is considered a rare and endangered tree species because of severe reduction of its natural riverine habitat and potential hybridisation with the related non-indigenous taxa P. deltoides and P. x canadensis. As it is difficult to distinguish these taxa solely based on their morphology, we applied a PCR-based assay with an easy-to-use and robust molecular marker set (cpDNA trnL-trnF/RsaI RFLP, nDNA win3 and nDNA POPX/MspI RFLP) in order to identify pure P. nigra. Different plant tissues could be used for fast and standardised DNA extraction. The application of the three marker types was tested on a number of different Populus taxa, and they were also used for the verification of pure P. nigra in a sample of 304 putative P. nigra individuals from Switzerland. Cross-checking of the DNA data with those using a traditional allozyme approach resulted in complete agreement. The availability of molecular identification methods is an important prerequisite for the conservation of European Black Poplar, because pure, non-introgressed plant material can then be used in restoration projects of European floodplains."],["dc.identifier.doi","10.1007/s00468-005-0006-6"],["dc.identifier.isi","000232984900015"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/49663"],["dc.language.iso","en"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.relation.issn","0931-1890"],["dc.title","Application of genetic markers to the discrimination of European Black Poplar (Populus nigra) from American Black Poplar (P-deltoides) and Hybrid Poplars (P. x canadensis) in Switzerland"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","356"],["dc.bibliographiccitation.issue","3"],["dc.bibliographiccitation.journal","Plant Biology"],["dc.bibliographiccitation.lastpage","364"],["dc.bibliographiccitation.volume","10"],["dc.contributor.author","Stefenon, Valdir Marcos"],["dc.contributor.author","Gailing, Oliver"],["dc.contributor.author","Finkeldey, Reiner"],["dc.date.accessioned","2018-11-07T11:15:48Z"],["dc.date.accessioned","2020-05-14T07:33:30Z"],["dc.date.available","2018-11-07T11:15:48Z"],["dc.date.available","2020-05-14T07:33:30Z"],["dc.date.issued","2008"],["dc.description.abstract","The morphological features of pollen and seed of Araucaria angustifolia have led to the proposal of limited gene dispersal for this species. We used nuclear microsatellite and AFLP markers to assess patterns of genetic variation in six natural populations at the intra- and inter-population level, and related our findings to gene dispersal in this species. Estimates of both fine-scale spatial genetic structure (SGS) and migration rate suggest relatively short-distance gene dispersal. However, gene dispersal differed among populations, and effects of more efficient dispersal within population were observed in at least one stand. In addition, even though some seed dispersal may be aggregated in this principally barochorous species, reasonable secondary seed dispersal, presumably facilitated by animals, and overlap of seed shadows within populations is suggested. Overall, no correlation was observed between levels of SGS and inbreeding, density or age structure, except that a higher level of SGS was revealed for the population with a higher number of juvenile individuals. A low estimate for the number of migrants per generation between two neighbouring populations implies limited gene flow. We expect that stepping-stone pollen flow may have contributed to low genetic differentiation among populations observed in a previous survey. Thus, strategies for maintenance of gene flow among remnant populations should be considered in order to avoid degrading effects of population fragmentation on the evolution of A. angustifolia."],["dc.identifier.doi","10.1111/j.1438-8677.2008.00048.x"],["dc.identifier.isi","000255140200008"],["dc.identifier.pmid","18426482"],["dc.identifier.scopus","2-s2.0-42449093285"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/65388"],["dc.identifier.url","http://www.scopus.com/inward/record.url?eid=2-s2.0-42449093285&partnerID=MN8TOARS"],["dc.language.iso","en"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.relation.eissn","1438-8677"],["dc.relation.issn","1435-8603"],["dc.title","The role of gene flow in shaping genetic structures of the subtropical conifer species Araucaria angustifolia"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","2264"],["dc.bibliographiccitation.issue","8"],["dc.bibliographiccitation.journal","Molecular Ecology"],["dc.bibliographiccitation.lastpage","2279"],["dc.bibliographiccitation.volume","22"],["dc.contributor.author","Ohtani, Masato"],["dc.contributor.author","Kondo, Toshiaki"],["dc.contributor.author","Tani, Naoki"],["dc.contributor.author","Ueno, Saneyoshi"],["dc.contributor.author","Lee, Leong S."],["dc.contributor.author","Ng, Kevin K. S."],["dc.contributor.author","Muhammad, Norwati"],["dc.contributor.author","Finkeldey, Reiner"],["dc.contributor.author","Na'iem, Mohamad"],["dc.contributor.author","Indrioko, Sapto"],["dc.contributor.author","Kamiya, Koichi"],["dc.contributor.author","Harada, K. O."],["dc.contributor.author","Diway, Bibian"],["dc.contributor.author","Khoo, Eyen"],["dc.contributor.author","Kawamura, Kensuke"],["dc.contributor.author","Tsumura, Yoshihiko"],["dc.date.accessioned","2018-11-07T09:26:33Z"],["dc.date.available","2018-11-07T09:26:33Z"],["dc.date.issued","2013"],["dc.description.abstract","Tropical rainforests in South-East Asia have been affected by climatic fluctuations during past glacial eras. To examine how the accompanying changes in land areas and temperature have affected the genetic properties of rainforest trees in the region, we investigated the phylogeographic patterns of a widespread dipterocarp species, Shorea leprosula. Two types of DNA markers were used: expressed sequence tag-based simple sequence repeats and chloroplast DNA (cpDNA) sequence variations. Both sets of markers revealed clear genetic differentiation between populations in Borneo and those in the Malay Peninsula and Sumatra (Malay/Sumatra). However, in the south-western part of Borneo, genetic admixture of the lineages was observed in the two marker types. Coalescent simulation based on cpDNA sequence variation suggested that the two lineages arose 0.280.09million years before present and that following their divergence migration from Malay/Sumatra to Borneo strongly exceeded migration in the opposite direction. We conclude that the genetic structure of S.leprosula was largely formed during the middle Pleistocene and was subsequently modified by eastward migration across the subaerially exposed Sunda Shelf."],["dc.identifier.doi","10.1111/mec.12243"],["dc.identifier.isi","000317137200016"],["dc.identifier.pmid","23432376"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/30327"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.publisher","Wiley-blackwell"],["dc.relation.issn","0962-1083"],["dc.title","Nuclear and chloroplast DNA phylogeography reveals Pleistocene divergence and subsequent secondary contact of two genetic lineages of the tropical rainforest tree species Shorea leprosula (Dipterocarpaceae) in South-East Asia"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.status","published"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","113"],["dc.bibliographiccitation.issue","2"],["dc.bibliographiccitation.journal","Plant Molecular Biology Reporter"],["dc.bibliographiccitation.lastpage","119"],["dc.bibliographiccitation.volume","23"],["dc.contributor.author","Nascimento de Sousa, Sylvia"],["dc.contributor.author","Finkeldey, Reiner"],["dc.contributor.author","Gailing, Oliver"],["dc.date.accessioned","2018-11-07T10:58:21Z"],["dc.date.available","2018-11-07T10:58:21Z"],["dc.date.issued","2005"],["dc.description.abstract","Three stands of Picea abies [L.] Karst. with different density in the Harz Mountains (Lower Saxony, Germany) were characterized at 4 microsatellite loci. An excess of homozygotes was observed in all 3 stands at I simple sequence repeat (SSR) locus, suggesting the presence of null alleles. To test for the segregation of a null allele, 24 open-pollinated seeds (haploid megagametophytes and embryos) from apparently homozygous mother trees were analyzed. For 1 of 3 trees that could be identified as heterozygous for a null allele, no significant deviation from the expected 1: 1 segregation into marker absence (null allele) and marker presence of the second maternal allele could be observed in the haploid megagametophyte. Concordantly, the numbers of embryos heterozygous for the null allele and for the other maternal allele were not significantly different from each other. Inheritance analyses in seedlings and corresponding megagametophytes of gymnosperms were used as a direct experimental verification of microsatellite null alleles in single-tree progeny. Microsatellites with an abundance of null alleles should be discarded from further analysis because inclusion of these loci results in incorrect estimation of allele frequencies."],["dc.identifier.isi","000233144500001"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/50460"],["dc.language.iso","en"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.relation.issn","0735-9640"],["dc.title","Experimental verification of microsatellite null alleles in Norway spruce (Picea abies [L.] Karst.): Implications for population genetic studies"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","248"],["dc.bibliographiccitation.issue","11-12"],["dc.bibliographiccitation.journal","Allgemeine Forst- und Jagdzeitung"],["dc.bibliographiccitation.lastpage","256"],["dc.bibliographiccitation.volume","183"],["dc.contributor.author","Perovic, M."],["dc.contributor.author","Prinz, Kathleen"],["dc.contributor.author","Finkeldey, Reiner"],["dc.contributor.author","Cvjeticanin, R."],["dc.date.accessioned","2018-11-07T09:14:34Z"],["dc.date.available","2018-11-07T09:14:34Z"],["dc.date.issued","2012"],["dc.description.sponsorship","Ministry of Education and Science of the Republic of Serbia [31041]"],["dc.identifier.isi","000315177300003"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/27446"],["dc.language.iso","en"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.relation.issn","0002-5852"],["dc.title","Genetic variation of Greek maple (Acer heldreichii Orph.) populations in the Western Balkan region"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","1435"],["dc.bibliographiccitation.issue","5"],["dc.bibliographiccitation.journal","Tree Genetics & Genomes"],["dc.bibliographiccitation.lastpage","1449"],["dc.bibliographiccitation.volume","10"],["dc.contributor.author","Minn, Yazar"],["dc.contributor.author","Prinz, Kathleen"],["dc.contributor.author","Finkeldey, Reiner"],["dc.date.accessioned","2018-11-07T09:34:54Z"],["dc.date.available","2018-11-07T09:34:54Z"],["dc.date.issued","2014"],["dc.description.abstract","Genetic variation of teak (Tectona grandis Linn. f.) in 16 populations in Myanmar was investigated using ten nuclear microsatellite markers. Eight population pairs from two main regions in the north and the south of Myanmar were sampled. Each population pair consisted of an unlogged and a recently logged forest, each represented by 50 adult trees and 50 seedlings from the natural regeneration. For comparison, two land races from Benin (West Africa) were included. The major objectives of the study are to characterize the patterns of genetic variation of teak in natural populations, to examine genetic differentiation between adult trees and natural regeneration, and to investigate the impact of selective logging on genetic structures of teak. Genetic variation was high in all investigated populations. Slightly elevated levels of inbreeding were observed in the regeneration in comparison to the adults. Populations from the northern and the southern regions were strongly differentiated, but the differentiation between adults and natural regeneration and between unlogged and logged forests was low and not significant. Mantel tests indicated an isolation by distance (IBD) within the northern and the southern regions. High genetic diversity was also observed within the land races from Benin, which grouped to the southern populations. We failed to detect effects of logging on genetic diversity patterns or inbreeding in adults and regeneration, suggesting that high genetic diversity can even be sampled and maintained in disturbed forests. The observation of significant IBD and high differentiation between the populations of the north and the south of Myanmar suggests to include populations from widely separated forests in conservation programs, and to delineate provenance regions for the harvest and transfer of teak seeds and seedlings."],["dc.description.sponsorship","Deutsche Bundesstiftung Unwelt (DBU)"],["dc.identifier.doi","10.1007/s11295-014-0772-7"],["dc.identifier.isi","000342229000025"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/32275"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.publisher","Springer"],["dc.publisher.place","Heidelberg"],["dc.relation.issn","1614-2950"],["dc.relation.issn","1614-2942"],["dc.title","Genetic variation of teak (Tectona grandis Linn. f.) in Myanmar revealed by microsatellites"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.status","published"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","E372"],["dc.bibliographiccitation.issue","9"],["dc.bibliographiccitation.journal","American Journal of Botany"],["dc.bibliographiccitation.lastpage","E374"],["dc.bibliographiccitation.volume","99"],["dc.contributor.author","Barrandeguy, Maria E."],["dc.contributor.author","Prinz, Kathleen"],["dc.contributor.author","Garcia, Maria V."],["dc.contributor.author","Finkeldey, Reiner"],["dc.date.accessioned","2018-11-07T09:06:12Z"],["dc.date.available","2018-11-07T09:06:12Z"],["dc.date.issued","2012"],["dc.description.abstract","Premise of the study: Microsatellite primers were developed in the native legume tree Anadenanthera colubrina var. cebil to study the genetic diversity and genetic structure in natural populations in Argentina. Methods and Results: Nine microsatellite markers were identified using a genomic library enriched for tandemly repeated motifs, eight of which markers were polymorphic. The polymorphism of these markers was assessed by investigating 20 individuals for fragment polymorphism; three to 13 alleles were observed for each locus. Observed and expected heterozygosities ranged from 0.300 to 1.000 and from 0.463 to 0.900, respectively. Conclusions: These results confirm that these primers will be useful for investigating the genetic diversity and genetic structure of natural populations of A. colubrina var. cebil in future studies."],["dc.description.sponsorship","German Academic Exchange Service (DAAD)"],["dc.identifier.doi","10.3732/ajb.1200078"],["dc.identifier.isi","000308689800010"],["dc.identifier.pmid","22935360"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/25499"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.publisher","Botanical Soc Amer Inc"],["dc.relation.issn","0002-9122"],["dc.title","DEVELOPMENT OF MICROSATELLITE MARKERS FOR ANADENANTHERA COLUBRINA VAR. CEBIL (FABACEAE), A NATIVE TREE FROM SOUTH AMERICA"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.status","published"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","1361"],["dc.bibliographiccitation.issue","5"],["dc.bibliographiccitation.journal","Tree Genetics & Genomes"],["dc.bibliographiccitation.lastpage","1367"],["dc.bibliographiccitation.volume","9"],["dc.contributor.author","Gailing, Oliver"],["dc.contributor.author","Bodenes, Catherine"],["dc.contributor.author","Finkeldey, Reiner"],["dc.contributor.author","Kremer, Antoine"],["dc.contributor.author","Plomion, Christophe"],["dc.date.accessioned","2018-11-07T09:19:36Z"],["dc.date.accessioned","2020-05-13T11:59:36Z"],["dc.date.available","2018-11-07T09:19:36Z"],["dc.date.available","2020-05-13T11:59:36Z"],["dc.date.issued","2013"],["dc.description.abstract","The availability of genomic resources such as expressed sequence tag-derived simple sequence repeat (EST-SSR) markers in adaptive genes with high transferability across related species allows the construction of genetic maps and the comparison of genome structure and quantitative trait loci (QTL) positions. In the present study, genetic linkage maps were constructed for both parents of a Quercus robur x Q. robur ssp. slavonica full-sib pedigree. A total of 182 markers (61 AFLPs, 23 nuclear SSRs, 98 EST-SSRs) and 172 markers (49 AFLPs, 21 nSSRs, 101 EST-SSRs, 1 isozyme) were mapped on the female and male linkage maps, respectively. The total map length and average marker spacing were 1,038 and 5.7 cM for the female map and 998.5 and 5.8 cM for the male map. A total of 68 nuclear SSRs and EST-SSRs segregating in both parents allowed to define homologous linkage groups (LG) between both parental maps. QTL for leaf morphological traits were mapped on all 12 LG at a chromosome-wide level and on 6 LG at a genome-wide level. The phenotypic effects explained by each single QTL ranged from 4.0 % for leaf area to 15.8 % for the number of intercalary veins. QTL clusters for leaf characters that discriminate between Q. robur and Quercus petraea were mapped reproducibly on three LG, and some putative candidate genes among potentially many others were identified on LG3 and LG5. Genetic linkage maps based on EST-SSRs can be valuable tools for the identification of genes involved in adaptive trait variation and for comparative mapping."],["dc.identifier.doi","10.1007/s11295-013-0633-9"],["dc.identifier.isi","000324514800020"],["dc.identifier.scopus","2-s2.0-84884380863"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/65332"],["dc.identifier.url","http://www.scopus.com/inward/record.url?eid=2-s2.0-84884380863&partnerID=MN8TOARS"],["dc.language.iso","en"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.relation.eissn","1614-2950"],["dc.relation.issn","1614-2942"],["dc.title","Genetic mapping of EST-derived simple sequence repeats (EST-SSRs) to identify QTL for leaf morphological characters in a Quercus robur full-sib family"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","119"],["dc.bibliographiccitation.issue","2"],["dc.bibliographiccitation.journal","European Journal of Forest Research"],["dc.bibliographiccitation.lastpage","124"],["dc.bibliographiccitation.volume","124"],["dc.contributor.author","Papageorgiou, Aristotelis C."],["dc.contributor.author","Finkeldey, Reiner"],["dc.contributor.author","Hattemer, Hans H."],["dc.contributor.author","Xenopoulos, S."],["dc.date.accessioned","2018-11-07T10:35:14Z"],["dc.date.available","2018-11-07T10:35:14Z"],["dc.date.issued","2005"],["dc.description.abstract","Individuals were selected for resistance against the imperfect fungus Seiridium cardinale Wag in six common cypress populations (Cupressus sempervirens L.) in Greece. A total of 109 resistant clones and 140 trees from their base populations were surveyed at several allozyme loci. The comparison yielded information on changes in genetic variation due to artificial selection. The genetic structure of the breeding populations was similar to their base populations. Nevertheless, the number of rare alleles among the resistant clones had decreased, showing a similar trend at most loci and for most comparisons. Possible implications for breeding strategies are discussed."],["dc.identifier.doi","10.1007/s10342-005-0063-9"],["dc.identifier.isi","000229875400006"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/45046"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.publisher","Springer"],["dc.relation.issn","1612-4669"],["dc.title","Genetic differences between autochthonous and breeding populations of common cypress (Cupressus sempervirens L.) in Greece"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.status","published"],["dspace.entity.type","Publication"]]