Knorr, Christophe

[["dc.bibliographiccitation.firstpage","523"],["dc.bibliographiccitation.issue","5"],["dc.bibliographiccitation.journal","Animal Genetics"],["dc.bibliographiccitation.lastpage","525"],["dc.bibliographiccitation.volume","37"],["dc.contributor.author","Knorr, C."],["dc.contributor.author","Beck, J."],["dc.contributor.author","Beuermann, Christian"],["dc.contributor.author","Chen, K."],["dc.contributor.author","Ding, Nengshui"],["dc.contributor.author","Gatphayak, Kesinee"],["dc.contributor.author","Huang, L. S."],["dc.contributor.author","Laenoi, W."],["dc.contributor.author","Brenig, Bertram"],["dc.date.accessioned","2018-11-07T09:08:19Z"],["dc.date.available","2018-11-07T09:08:19Z"],["dc.date.issued","2006"],["dc.identifier.doi","10.1111/j.1365-2052.2006.01507.x"],["dc.identifier.isi","000240565900019"],["dc.identifier.pmid","16978189"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/26001"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.relation.issn","0268-9146"],["dc.title","Chromosomal assignment of porcine oncogenic and apoptopic genes CACNA2D2, TUSC4, ATP2A1, COL1A1, TAC1, BAK1 and CASP9"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","143"],["dc.bibliographiccitation.issue","2"],["dc.bibliographiccitation.journal","Animal Genetics"],["dc.bibliographiccitation.lastpage","145"],["dc.bibliographiccitation.volume","35"],["dc.contributor.author","Chen, K. F."],["dc.contributor.author","Beck, J."],["dc.contributor.author","Huang, L. S."],["dc.contributor.author","Knorr, C."],["dc.contributor.author","Brenig, Bertram"],["dc.date.accessioned","2018-11-07T10:49:43Z"],["dc.date.available","2018-11-07T10:49:43Z"],["dc.date.issued","2004"],["dc.identifier.doi","10.1111/j.1365-2052.2004.01092.x"],["dc.identifier.isi","000220273100013"],["dc.identifier.pmid","15025578"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/48495"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.publisher","Blackwell Publishing Ltd"],["dc.relation.issn","0268-9146"],["dc.title","Assignment of the phosphoglycerate kinase 1 (PGK1) gene to porcine chromosome Xq12-q13 by fluorescence in situ hybridization and hybrid panel analyses"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.status","published"],["dc.type.subtype","letter_note"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","471"],["dc.bibliographiccitation.issue","6"],["dc.bibliographiccitation.journal","Animal Genetics"],["dc.bibliographiccitation.lastpage","473"],["dc.bibliographiccitation.volume","34"],["dc.contributor.author","Ren, Jun"],["dc.contributor.author","Knorr, C."],["dc.contributor.author","Habermann, F."],["dc.contributor.author","Fries, R."],["dc.contributor.author","Huang, L. S."],["dc.contributor.author","Brenig, Bertram"],["dc.date.accessioned","2018-11-07T10:34:12Z"],["dc.date.available","2018-11-07T10:34:12Z"],["dc.date.issued","2003"],["dc.identifier.doi","10.1046/j.0268-9146.2003.01058.x"],["dc.identifier.isi","000186678100018"],["dc.identifier.pmid","14687086"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/44805"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.publisher","Blackwell Publishing Ltd"],["dc.relation.issn","0268-9146"],["dc.title","Assignment of the porcine stearoyl-CoA desaturase (SCD) gene to SSC14q27 by fluorescence in situ hybridization and by hybrid panel mapping"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.status","published"],["dc.type.subtype","letter_note"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","573"],["dc.bibliographiccitation.issue","5"],["dc.bibliographiccitation.journal","Animal Genetics"],["dc.bibliographiccitation.lastpage","574"],["dc.bibliographiccitation.volume","39"],["dc.contributor.author","Xing, Y. Y."],["dc.contributor.author","Huang, L. S."],["dc.contributor.author","Brenig, Bertram"],["dc.contributor.author","Knorr, C."],["dc.date.accessioned","2018-11-07T11:10:14Z"],["dc.date.available","2018-11-07T11:10:14Z"],["dc.date.issued","2008"],["dc.identifier.doi","10.1111/j.1365-2052.2008.01758.x"],["dc.identifier.isi","000259360000020"],["dc.identifier.pmid","18644008"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/53174"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.publisher","Wiley-blackwell"],["dc.relation.issn","0268-9146"],["dc.title","Radiation hybrid mapping of seven porcine calcium channel genes (CATSPER1-4 and CNGA1-3) associated with male fertility"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.status","published"],["dc.type.subtype","letter_note"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.artnumber","54"],["dc.bibliographiccitation.journal","BMC Genetics"],["dc.bibliographiccitation.volume","6"],["dc.contributor.author","Chen, K. F."],["dc.contributor.author","Knorr, C."],["dc.contributor.author","Bornemann-Kolatzki, K."],["dc.contributor.author","Ren, Jun"],["dc.contributor.author","Huang, L. S."],["dc.contributor.author","Rohrer, G. A."],["dc.contributor.author","Brenig, Bertram"],["dc.date.accessioned","2018-11-07T10:54:16Z"],["dc.date.available","2018-11-07T10:54:16Z"],["dc.date.issued","2005"],["dc.description.abstract","Background: In the last few years, microsatellites have become the most popular molecular marker system and have intensively been applied in genome mapping, biodiversity and phylogeny studies of livestock. Compared to single nucleotide polymorphism (SNP) as another popular marker system, microsatellites reveal obvious advantages. They are multi-allelic, possibly more polymorphic and cheaper to genotype. Calculations showed that a multi-allelic marker system always has more power to detect Linkage Disequilibrium (LD) than does a di-allelic marker system [1]. Traditional isolation methods using partial genomic libraries are time-consuming and cost-intensive. In order to directly generate microsatellites from large-insert libraries a sequencing approach with repeat-containing oligonucleotides is introduced. Results: Seventeen porcine microsatellite markers were isolated from eleven PAC clones by targeted oligonucleotide-mediated microsatellite identification (TOMMI), an improved efficient and rapid flanking sequence-based approach for the isolation of STS-markers. With the application of TOMMI, an average of 1.55 (CA/GT) microsatellites per PAC clone was identified. The number of alleles, allele size distribution, polymorphism information content (PIC), average heterozygosity (H-T), and effective allele number (N-E) for the STS-markers were calculated using a sampling of 336 unrelated animals representing fifteen pig breeds (nine European and six Chinese breeds). Sixteen of the microsatellite markers proved to be polymorphic (2 to 22 alleles) in this heterogeneous sampling. Most of the publicly available (porcine) microsatellite amplicons range from approximately 80 bp to 200 bp. Here, we attempted to utilize as much sequence information as possible to develop STS-markers with larger amplicons. Indeed, fourteen of the seventeen STS-marker amplicons have minimal allele sizes of at least 200 bp. Thus, most of the generated STS-markers can easily be integrated into multilocus assays covering a broader separation spectrum. Linkage mapping results of the markers indicate their potential immediate use in QTL studies to further dissect trait associated chromosomal regions. Conclusion: The sequencing strategy described in this study provides a targeted, inexpensive and fast method to develop microsatellites from large-insert libraries. It is well suited to generate polymorphic markers for selected chromosomal regions, contigs of overlapping clones and yields sufficient high quality sequence data to develop amplicons greater than 250 bases."],["dc.identifier.doi","10.1186/1471-2156-6-54"],["dc.identifier.isi","000233969100001"],["dc.identifier.pmid","16287508"],["dc.identifier.purl","https://resolver.sub.uni-goettingen.de/purl?gs-1/4425"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/49528"],["dc.notes.intern","Merged from goescholar"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.publisher","Biomed Central Ltd"],["dc.relation.issn","1471-2156"],["dc.rights","Goescholar"],["dc.rights.uri","https://goescholar.uni-goettingen.de/licenses"],["dc.title","Targeted oligonucleotide-mediated microsatellite identification (TOMMI) from large-insert library clones"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.status","published"],["dc.type.version","published_version"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","71"],["dc.bibliographiccitation.issue","1"],["dc.bibliographiccitation.journal","Animal Genetics"],["dc.bibliographiccitation.lastpage","72"],["dc.bibliographiccitation.volume","35"],["dc.contributor.author","Chen, K. F."],["dc.contributor.author","Beck, J."],["dc.contributor.author","Huang, L. S."],["dc.contributor.author","Knorr, C."],["dc.contributor.author","Brenig, Bertram"],["dc.date.accessioned","2018-11-07T10:51:13Z"],["dc.date.available","2018-11-07T10:51:13Z"],["dc.date.issued","2004"],["dc.identifier.doi","10.1046/j.1365-2052.2003.01066.x"],["dc.identifier.isi","000188304800017"],["dc.identifier.pmid","14731237"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/48844"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.publisher","Blackwell Publishing Ltd"],["dc.relation.issn","0268-9146"],["dc.title","Assignment of the phosphoglycerate kinase 2 (PGK2) gene to porcine chromosome 7q14-q15 by fluorescence in situ hybridization and by analysis of somatic cell and radiation hybrid panels"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.status","published"],["dc.type.subtype","letter_note"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","43"],["dc.bibliographiccitation.issue","1"],["dc.bibliographiccitation.journal","Animal Biotechnology"],["dc.bibliographiccitation.lastpage","49"],["dc.bibliographiccitation.volume","17"],["dc.contributor.author","Chen, K. F."],["dc.contributor.author","Knorr, C."],["dc.contributor.author","Bornemann-Kolatzki, K."],["dc.contributor.author","Huang, L. S."],["dc.contributor.author","Rohrer, G. A."],["dc.contributor.author","Brenig, Bertram"],["dc.date.accessioned","2018-11-07T09:50:21Z"],["dc.date.available","2018-11-07T09:50:21Z"],["dc.date.issued","2006"],["dc.description.abstract","We isolated and characterized the highly polymorphic tetra-nucleotide microsatellite S0719 on SSC7q14-q15 adjacent to the porcine testis-specific phosphoglycerate kinase 2 ( PGK2 ) gene and assigned it to the USDA-MARC linkage map on SSC7 position 77.5 cM closely linked to markers SW859 (76.3 cM) and SWR2036 (79.0 cM). In a panel of 344 individuals representing 11 pig breeds (European, Chinese, and North American), a total of 32 alleles were observed, and the overall breeds' calculated PIC (polymorphism information content), H-E (heterozygosity), and N-E (effective allele number) were 0.94, 0.94, and 16.41. Breed-specific PIC and H-E ranged from 0.66 to 0.87, whereas N-E was as low as 2.95 and as high as 7.96. Considering the high allelic variation of S0719 within and among pig breeds (79% of the genotyped animals were heterozygous), the marker is useful for individual animal identification and parentage determination. Finally, S0719 is also a valuable STS marker for fine-mapping QTL on SSC7 as position 77.5 cM is located in 25 QTL intervals ( http://www.animalgenome.org/QTLdb/ )."],["dc.identifier.doi","10.1080/10495390500461005"],["dc.identifier.isi","000236854100005"],["dc.identifier.pmid","16688886"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/35690"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.publisher","Taylor & Francis Inc"],["dc.relation.issn","1049-5398"],["dc.title","Characterization of the PGK2 associated microsatellite S0719 on SSC7 suitable for parentage and QTL diagnosis"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.status","published"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","255"],["dc.bibliographiccitation.issue","3"],["dc.bibliographiccitation.journal","Animal Genetics"],["dc.bibliographiccitation.lastpage","257"],["dc.bibliographiccitation.volume","35"],["dc.contributor.author","Ren, Jun"],["dc.contributor.author","Knorr, C."],["dc.contributor.author","Guo, Y. M."],["dc.contributor.author","Ding, Nengshui"],["dc.contributor.author","Ai, H. S."],["dc.contributor.author","Brenig, Bertram"],["dc.contributor.author","Huang, L. S."],["dc.date.accessioned","2018-11-07T10:48:14Z"],["dc.date.available","2018-11-07T10:48:14Z"],["dc.date.issued","2004"],["dc.identifier.doi","10.1111/j.1365-2052.2004.01129.x"],["dc.identifier.isi","000221488300022"],["dc.identifier.pmid","15147407"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/48142"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.publisher","Blackwell Publishing Ltd"],["dc.relation.issn","0268-9146"],["dc.title","Characterization of five single nucleotide polymorphisms in the porcine stearoyl-CoA desaturase (SCD) gene"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.status","published"],["dc.type.subtype","letter_note"],["dspace.entity.type","Publication"]]