Now showing 1 - 8 of 8
  • 2018Conference Abstract
    [["dc.contributor.author","Bauer, Christian R."],["dc.contributor.author","Knopp, Cornelius"],["dc.contributor.author","Bender, Theresa"],["dc.contributor.author","Kusch, Harald"],["dc.contributor.author","Sax, Ulrich"],["dc.creator.author","Ulrich Sax"],["dc.creator.author","Christian R. Bauer"],["dc.creator.author","Theresa Bender"],["dc.creator.author","Harald Kusch"],["dc.creator.author","Cornelius Knopp"],["dc.date.accessioned","2019-10-16T07:41:00Z"],["dc.date.available","2019-10-16T07:41:00Z"],["dc.date.issued","2018"],["dc.identifier.doi","10.3205/18gmds093"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/62502"],["dc.identifier.url","https://sfb1002.med.uni-goettingen.de/production/literature/publications/227"],["dc.language.iso","en"],["dc.relation","SFB 1002: Modulatorische Einheiten bei Herzinsuffizienz"],["dc.relation","SFB 1002 | INF: Unterstützung der SFB 1002 Forschungsdatenintegration, -visualisierung und -nachnutzung"],["dc.relation.conference","63. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie e. V. (GMDS)"],["dc.relation.eventlocation","Osnabrück"],["dc.relation.eventstart","2018"],["dc.relation.workinggroup","RG Nußbeck"],["dc.title","Application of basic research data management with FAIRDOM/SEEK from a medical informatics perspective"],["dc.type","conference_abstract"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]
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  • 2018Conference Abstract
    [["dc.contributor.author","Knopp, Cornelius"],["dc.contributor.author","Bauer, Christian R."],["dc.contributor.author","Kusch, Harald"],["dc.contributor.author","Sax, Ulrich"],["dc.creator.author","Cornelius Knopp"],["dc.creator.author","Harald Kusch"],["dc.creator.author","Ulrich Sax"],["dc.creator.author","Christian R. Bauer"],["dc.date.accessioned","2019-10-16T07:39:08Z"],["dc.date.available","2019-10-16T07:39:08Z"],["dc.date.issued","2018"],["dc.identifier.doi","10.3205/18gmds172"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/62501"],["dc.identifier.url","https://sfb1002.med.uni-goettingen.de/production/literature/publications/229"],["dc.language.iso","en"],["dc.relation","SFB 1002: Modulatorische Einheiten bei Herzinsuffizienz"],["dc.relation","SFB 1002 | INF: Unterstützung der SFB 1002 Forschungsdatenintegration, -visualisierung und -nachnutzung"],["dc.relation.conference","63. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie e. V. (GMDS)"],["dc.relation.eventlocation","Osnabrück"],["dc.relation.eventstart","2018"],["dc.relation.workinggroup","RG Nußbeck"],["dc.title","Usage of persistent identifiers to implement the FAIR guiding principles in medical research data management systems"],["dc.type","conference_abstract"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]
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  • 2017Journal Article
    [["dc.bibliographiccitation.firstpage","479"],["dc.bibliographiccitation.issue","3"],["dc.bibliographiccitation.journal","Briefings in Bioinformatics"],["dc.bibliographiccitation.lastpage","487"],["dc.bibliographiccitation.volume","18"],["dc.contributor.author","Bauer, Christian R."],["dc.contributor.author","Knecht, Carolin"],["dc.contributor.author","Fretter, Christoph"],["dc.contributor.author","Baum, Benjamin"],["dc.contributor.author","Jendrossek, Sandra"],["dc.contributor.author","Ruehlemann, Malte"],["dc.contributor.author","Heinsen, Femke-Anouska"],["dc.contributor.author","Umbach, Nadine"],["dc.contributor.author","Grimbacher, Bodo"],["dc.contributor.author","Franke, Andre"],["dc.contributor.author","Lieb, Wolfgang"],["dc.contributor.author","Krawczak, Michael"],["dc.contributor.author","Huett, Marc-Thorsten"],["dc.contributor.author","Sax, Ulrich"],["dc.date.accessioned","2018-11-07T10:24:26Z"],["dc.date.available","2018-11-07T10:24:26Z"],["dc.date.issued","2017"],["dc.description.abstract","Electronic access to multiple data types, from generic information on biological systems at different functional and cellular levels to high-throughputmolecular data from human patients, is a prerequisite of successful systems medicine research. However, scientists often encounter technical and conceptual difficulties that forestall the efficient and effective use of these resources. We summarize and discuss some of these obstacles, and suggest ways to avoid or evade them. The methodological gap between data capturing and data analysis is huge in human medical research. Primary data producers often do not fully apprehend the scientific value of their data, whereas data analysts maybe ignorant of the circumstances under which the data were collected. Therefore, the provision of easy-to-use data access tools not only helps to improve data quality on the part of the data producers but also is likely to foster an informed dialogue with the data analysts. We propose a means to integrate phenotypic data, questionnaire data and microbiome data with a user-friendly Systems Medicine toolbox embedded into i2b2/tranSMART. Our approach is exemplified by the integration of a basic outlier detection tool and a more advanced microbiome analysis (alpha diversity) script. Continuous discussion with clinicians, data managers, biostatisticians and systems medicine experts should serve to enrich even further the functionality of toolboxes like ours, being geared to be used by 'informed non-experts' but at the same time attuned to existing, more sophisticated analysis tools."],["dc.identifier.doi","10.1093/bib/bbw024"],["dc.identifier.isi","000400968000012"],["dc.identifier.pmid","27016392"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/42664"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","PUB_WoS_Import"],["dc.publisher","Oxford Univ Press"],["dc.relation.issn","1477-4054"],["dc.relation.issn","1467-5463"],["dc.title","Interdisciplinary approach towards a systems medicine toolbox using the example of inflammatory diseases"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.status","published"],["dspace.entity.type","Publication"]]
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  • 2017Conference Paper
    [["dc.contributor.author","Parciak, Marcel"],["dc.contributor.author","Bauer, Christian R."],["dc.contributor.author","Baum, Benjamin"],["dc.contributor.author","Kusch, Harald"],["dc.contributor.author","Sax, Ulrich"],["dc.contributor.orcid","0000-0002-9895-2469"],["dc.creator.author","Kusch, Harald"],["dc.date.accessioned","2019-10-16T07:24:32Z"],["dc.date.available","2019-10-16T07:24:32Z"],["dc.date.issued","2017"],["dc.identifier.doi","10.3205/17gmds155"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/62496"],["dc.identifier.url","https://sfb1002.med.uni-goettingen.de/production/literature/publications/182"],["dc.language.iso","en"],["dc.notes.preprint","yes"],["dc.relation","SFB 1002: Modulatorische Einheiten bei Herzinsuffizienz"],["dc.relation","SFB 1002 | INF: Unterstützung der SFB 1002 Forschungsdatenintegration, -visualisierung und -nachnutzung"],["dc.relation.conference","62. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie e. V. (GMDS)"],["dc.relation.eventlocation","Oldenburg"],["dc.relation.eventstart","2017"],["dc.relation.iserratumof","yes"],["dc.relation.workinggroup","RG Nußbeck"],["dc.title","Technical Aspects of Data Provenance in Clinical Trials"],["dc.type","conference_paper"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]
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  • 2021Conference Abstract
    [["dc.contributor.author","Kusch, Harald"],["dc.contributor.author","Bauer, Christian R."],["dc.contributor.author","Bender, Theresa"],["dc.contributor.author","Hügel, Jonas"],["dc.contributor.author","Kossen, Robert"],["dc.contributor.author","Nussbeck, Sara Yasemin"],["dc.contributor.author","Sax, Ulrich"],["dc.date.accessioned","2022-02-23T08:36:16Z"],["dc.date.available","2022-02-23T08:36:16Z"],["dc.date.issued","2021"],["dc.identifier.doi","10.3205/21gmds072"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/100216"],["dc.identifier.url","https://mbexc.uni-goettingen.de/literature/publications/345"],["dc.relation","EXC 2067: Multiscale Bioimaging"],["dc.relation.conference","66. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie e. V. (GMDS), 12. Jahreskongress der Technologie- und Methodenplattform für die vernetzte medizinische Forschung e. V. (TMF)"],["dc.relation.eventend","2021-09-30"],["dc.relation.eventlocation","virtuell"],["dc.relation.eventstart","2021-09-26"],["dc.relation.orgunit","Institut für Medizinische Informatik"],["dc.relation.orgunit","Campus-Institut Data Science"],["dc.relation.workinggroup","RG Kusch"],["dc.title","The bumpy road of FAIRification in practice"],["dc.type","conference_abstract"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]
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  • 2021Conference Abstract
    [["dc.bibliographiccitation.journal","GMS German Medical Science"],["dc.contributor.author","Bender, Theresa"],["dc.contributor.author","Parciak, Marcel"],["dc.contributor.author","Suhr, Markus"],["dc.contributor.author","Sax, Ulrich"],["dc.contributor.author","Bauer, Christian R."],["dc.date.accessioned","2022-05-17T08:04:51Z"],["dc.date.available","2022-05-17T08:04:51Z"],["dc.date.issued","2021"],["dc.identifier.doi","10.3205/20gmds162"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/107990"],["dc.identifier.url","https://sfb1002.med.uni-goettingen.de/production/literature/publications/389"],["dc.relation","SFB 1002: Modulatorische Einheiten bei Herzinsuffizienz"],["dc.relation","SFB 1002 | INF: Unterstützung der SFB 1002 Forschungsdatenintegration, -visualisierung und -nachnutzung"],["dc.relation.conference","65th Annual Meeting of the German Association for Medical Informatics, Biometry and Epidemiology (GMDS), Meeting of the Central European Network (CEN: German Region, Austro-Swiss Region and Polish Region) of the International Biometric Society (IBS)"],["dc.relation.eventend","2020-09-09"],["dc.relation.eventlocation","Berlin"],["dc.relation.eventstart","2020-09-06"],["dc.relation.workinggroup","RG Nußbeck"],["dc.title","Sustainable Deployment of Research Infrastructure Components"],["dc.type","conference_abstract"],["dc.type.internalPublication","unknown"],["dspace.entity.type","Publication"]]
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  • 2017Journal Article Overview
    [["dc.bibliographiccitation.issue","4"],["dc.bibliographiccitation.journal","Information Technology"],["dc.bibliographiccitation.volume","59"],["dc.contributor.author","Baum, Benjamin"],["dc.contributor.author","Bauer, Christian R."],["dc.contributor.author","Franke, Thomas"],["dc.contributor.author","Kusch, Harald"],["dc.contributor.author","Parciak, Marcel"],["dc.contributor.author","Rottmann, Thorsten"],["dc.contributor.author","Umbach, Nadine"],["dc.contributor.author","Sax, Ulrich"],["dc.date.accessioned","2018-04-24T15:08:22Z"],["dc.date.available","2018-04-24T15:08:22Z"],["dc.date.issued","2017"],["dc.identifier.doi","10.1515/itit-2016-0031"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/13765"],["dc.identifier.url","https://sfb1002.med.uni-goettingen.de/production/literature/publications/176"],["dc.language.iso","en"],["dc.notes.status","zu prüfen"],["dc.relation","SFB 1002: Modulatorische Einheiten bei Herzinsuffizienz"],["dc.relation","SFB 1002 | INF: Unterstützung der SFB 1002 Forschungsdatenintegration, -visualisierung und -nachnutzung"],["dc.relation.workinggroup","RG Nußbeck"],["dc.title","Opinion paper: Data provenance challenges in biomedical research"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.subtype","overview_ja"],["dspace.entity.type","Publication"]]
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  • 2018Conference Abstract
    [["dc.bibliographiccitation.journal","GMS German Medical Science"],["dc.contributor.author","Parciak, Marcel"],["dc.contributor.author","Bauer, Christian R."],["dc.contributor.author","Lodahl, Robert"],["dc.contributor.author","Thoms, Caroline"],["dc.contributor.author","Kusch, Harald"],["dc.contributor.author","Rey, Sabine"],["dc.contributor.author","Sax, Ulrich"],["dc.date.accessioned","2022-05-16T13:13:27Z"],["dc.date.available","2022-05-16T13:13:27Z"],["dc.date.issued","2018"],["dc.identifier.doi","10.3205/18gmds096"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/107980"],["dc.identifier.url","https://sfb1002.med.uni-goettingen.de/production/literature/publications/228"],["dc.relation","SFB 1002: Modulatorische Einheiten bei Herzinsuffizienz"],["dc.relation","SFB 1002 | INF: Unterstützung der SFB 1002 Forschungsdatenintegration, -visualisierung und -nachnutzung"],["dc.relation.eventend","2018-09-06"],["dc.relation.eventlocation","Osnabrück"],["dc.relation.eventstart","2018-09-02"],["dc.relation.orgunit","Institut für Medizinische Informatik"],["dc.relation.workinggroup","RG Nußbeck"],["dc.title","PROV@TOS, a Java Wrapper to capture provenance for Talend Open Studio jobs"],["dc.type","conference_abstract"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]
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