Wemheuer, Bernd

[["dc.bibliographiccitation.firstpage","1"],["dc.bibliographiccitation.journal","Basic and Applied Ecology"],["dc.bibliographiccitation.lastpage","12"],["dc.bibliographiccitation.volume","49"],["dc.contributor.author","Tiede, Julia"],["dc.contributor.author","Diepenbruck, Melanie"],["dc.contributor.author","Gadau, Jürgen"],["dc.contributor.author","Wemheuer, Bernd"],["dc.contributor.author","Daniel, Rolf"],["dc.contributor.author","Scherber, Christoph"],["dc.date.accessioned","2021-04-14T08:30:12Z"],["dc.date.available","2021-04-14T08:30:12Z"],["dc.date.issued","2020"],["dc.identifier.doi","10.1016/j.baae.2020.09.004"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/83147"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-399"],["dc.relation.issn","1439-1791"],["dc.title","Seasonal variation in the diet of the serotine bat (Eptesicus serotinus): A high-resolution analysis using DNA metabarcoding"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.artnumber","14183"],["dc.bibliographiccitation.issue","1"],["dc.bibliographiccitation.journal","Scientific Reports"],["dc.bibliographiccitation.volume","9"],["dc.contributor.author","Wemheuer, Franziska"],["dc.contributor.author","Wemheuer, Bernd"],["dc.contributor.author","Daniel, Rolf"],["dc.contributor.author","Vidal, Stefan"],["dc.date.accessioned","2020-03-12T08:51:55Z"],["dc.date.available","2020-03-12T08:51:55Z"],["dc.date.issued","2019"],["dc.description.abstract","Green islands (the re-greening of senescent leaf tissues) are particularly evident on leaves infected with fungal pathogens. To date, there is only a limited number of studies investigating foliar endophytic microorganisms in phytopathogen-infected leaves. Here, we analysed bacterial and fungal endophyte communities in leaves without green islands (control leaves; CL), within green island areas (GLA) and the surrounding yellow leaf areas (YLA) of leaves with green islands of Acer campestre and A. platanoides. GLA samples of A. campestre and A. platanoides were dominated by Sawadaea polyfida and S. bicornis, respectively, suggesting that these fungi might be responsible for the green islands. We detected a higher fungal richness and diversity in CL compared to GLA samples of A. campestre. Leaf status (CL, GLA, YLA) significantly altered the composition of fungal communities of A. campestre. This was related to differences in fungal community composition between YLA and GLA samples. Site was the main driver of bacterial communities, suggesting that bacterial and fungal endophytes are shaped by different factors. Overall, we observed Acer species-specific responses of endophyte communities towards the presence of green islands and/or leaf type, which might be attributed to several fungi and bacteria specifically associated with one Acer species."],["dc.identifier.doi","10.1038/s41598-019-50540-2"],["dc.identifier.pmid","31578453"],["dc.identifier.purl","https://resolver.sub.uni-goettingen.de/purl?gs-1/16477"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/63324"],["dc.language.iso","en"],["dc.notes.intern","Merged from goescholar"],["dc.relation.eissn","2045-2322"],["dc.relation.issn","2045-2322"],["dc.rights","CC BY 4.0"],["dc.rights.uri","https://creativecommons.org/licenses/by/4.0"],["dc.title","Deciphering bacterial and fungal endophyte communities in leaves of two maple trees with green islands"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.version","published_version"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.issue","5"],["dc.bibliographiccitation.journal","Genome Announcements"],["dc.bibliographiccitation.volume","6"],["dc.contributor.author","Wemheuer, Franziska"],["dc.contributor.author","Hollensteiner, Jacqueline"],["dc.contributor.author","Poehlein, Anja"],["dc.contributor.author","Liesegang, Heiko"],["dc.contributor.author","Daniel, Rolf"],["dc.contributor.author","Wemheuer, Bernd"],["dc.date.accessioned","2020-04-28T12:41:35Z"],["dc.date.available","2020-04-28T12:41:35Z"],["dc.date.issued","2018"],["dc.description.abstract","Bacillus mycoides GM6LP is an endophyte isolated from plant tissues of Lolium perenne L. Here, we report its draft genome sequence (6.2 Mb), which contains 96 contigs and 6,129 protein-coding genes. Knowledge about its genome will enable us to evaluate the potential use of GM6LP as a plant growth-promoting bacterium."],["dc.identifier.doi","10.1128/genomeA.00011-18"],["dc.identifier.eissn","2169-8287"],["dc.identifier.pmid","29437086"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/64449"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-354"],["dc.relation.issn","2169-8287"],["dc.title","Draft Genome Sequence of the Endophyte Bacillus mycoides Strain GM6LP Isolated from Lolium perenne"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","922"],["dc.bibliographiccitation.issue","9"],["dc.bibliographiccitation.journal","Viruses"],["dc.bibliographiccitation.volume","12"],["dc.contributor.author","Heinrichs, Mara E."],["dc.contributor.author","Tebbe, Dennis A."],["dc.contributor.author","Wemheuer, Bernd"],["dc.contributor.author","Niggemann, Jutta"],["dc.contributor.author","Engelen, Bert"],["dc.date.accessioned","2021-04-14T08:32:27Z"],["dc.date.available","2021-04-14T08:32:27Z"],["dc.date.issued","2020"],["dc.description.sponsorship","Deutsche Forschungsgemeinschaft"],["dc.identifier.doi","10.3390/v12090922"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/83928"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-399"],["dc.publisher","MDPI"],["dc.relation.eissn","1999-4915"],["dc.rights","https://creativecommons.org/licenses/by/4.0/"],["dc.title","Impact of Viral Lysis on the Composition of Bacterial Communities and Dissolved Organic Matter in Deep-Sea Sediments"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","13"],["dc.bibliographiccitation.lastpage","21"],["dc.bibliographiccitation.seriesnr","2555"],["dc.contributor.author","Hollensteiner, Jacqueline"],["dc.contributor.author","Wemheuer, Franziska"],["dc.contributor.author","Schneider, Dominik"],["dc.contributor.author","Pfeiffer, Birgit"],["dc.contributor.author","Wemheuer, Bernd"],["dc.contributor.editor","Streit, Wolfgang R."],["dc.contributor.editor","Daniel, Rolf"],["dc.date.accessioned","2022-11-01T10:17:28Z"],["dc.date.available","2022-11-01T10:17:28Z"],["dc.date.issued","2023"],["dc.identifier.doi","10.1007/978-1-0716-2795-2_2"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/116819"],["dc.notes.intern","DOI-Import GROB-605"],["dc.publisher","Springer US"],["dc.publisher.place","New York, NY"],["dc.relation.crisseries","Methods in Molecular Biology"],["dc.relation.eisbn","978-1-0716-2795-2"],["dc.relation.isbn","978-1-0716-2794-5"],["dc.relation.ispartof","Metagenomics : Methods and Protocols"],["dc.title","Extraction of Total DNA and RNA from Marine Filter Samples and Generation of a Universal cDNA as Universal Template for Marker Gene Studies"],["dc.type","book_chapter"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.issue","4"],["dc.bibliographiccitation.journal","Genome Announcements"],["dc.bibliographiccitation.volume","6"],["dc.contributor.author","Poehlein, Anja"],["dc.contributor.author","Hollensteiner, Jacqueline"],["dc.contributor.author","Granzow, Sandra"],["dc.contributor.author","Wemheuer, Bernd"],["dc.contributor.author","Vidal, Stefan"],["dc.contributor.author","Wemheuer, Franziska"],["dc.date.accessioned","2020-12-10T18:37:01Z"],["dc.date.available","2020-12-10T18:37:01Z"],["dc.date.issued","2018"],["dc.description.abstract","Paenibacillus amylolyticus strain GM1FR is an endophyte isolated from aerial plant tissues of Festuca rubra L. Here, we report the draft genome sequence (7.3 Mb) of GM1FR containing 6,241 protein-coding genes, some of which are potentially involved in plant growth promotion and biocontrol."],["dc.identifier.doi","10.1128/genomeA.01516-17"],["dc.identifier.eissn","2169-8287"],["dc.identifier.pmid","29371353"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/76813"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-354"],["dc.relation.issn","2169-8287"],["dc.title","First Insights into the Draft Genome Sequence of the Endophyte Paenibacillus amylolyticus Strain GM1FR, Isolated from Festuca rubra L."],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","102094"],["dc.bibliographiccitation.journal","Aquacultural Engineering"],["dc.bibliographiccitation.volume","90"],["dc.contributor.author","Hüpeden, Jennifer"],["dc.contributor.author","Wemheuer, Bernd"],["dc.contributor.author","Indenbirken, Daniela"],["dc.contributor.author","Schulz, Carsten"],["dc.contributor.author","Spieck, Eva"],["dc.date.accessioned","2021-04-14T08:24:38Z"],["dc.date.available","2021-04-14T08:24:38Z"],["dc.date.issued","2020"],["dc.identifier.doi","10.1016/j.aquaeng.2020.102094"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/81366"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-399"],["dc.relation.issn","0144-8609"],["dc.title","Taxonomic and functional profiling of nitrifying biofilms in freshwater, brackish and marine RAS biofilters"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.issue","13"],["dc.bibliographiccitation.journal","Genome Announcements"],["dc.bibliographiccitation.volume","5"],["dc.contributor.author","Wemheuer, Franziska"],["dc.contributor.author","Hollensteiner, Jacqueline"],["dc.contributor.author","Poehlein, Anja"],["dc.contributor.author","Granzow, Sandra"],["dc.contributor.author","Daniel, Rolf"],["dc.contributor.author","Vidal, Stefan"],["dc.contributor.author","Wemheuer, Bernd"],["dc.date.accessioned","2020-12-10T18:36:53Z"],["dc.date.available","2020-12-10T18:36:53Z"],["dc.date.issued","2017"],["dc.description.abstract","Pseudomonas putida GM4FR is an endophytic bacterium isolated from aerial plant tissues of Festuca rubra L. Functional annotation of the draft genome (7.1 Mb) revealed 6,272 predicted protein-encoding genes. The genome provides insights into the biocontrol and plant growth-promoting potential of P. putida GM4FR."],["dc.identifier.doi","10.1128/genomeA.00086-17"],["dc.identifier.eissn","2169-8287"],["dc.identifier.pmid","28360162"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/76772"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-354"],["dc.relation.issn","2169-8287"],["dc.title","Draft Genome Sequence of Pseudomonas putida Strain GM4FR, an Endophytic Bacterium Isolated from Festuca rubra L"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.artnumber","2550"],["dc.bibliographiccitation.journal","Frontiers in Microbiology"],["dc.bibliographiccitation.volume","8"],["dc.contributor.author","Pohlner, Marion"],["dc.contributor.author","Degenhardt, Julius"],["dc.contributor.author","von Hoyningen-Huene, Avril J. E."],["dc.contributor.author","Wemheuer, Bernd"],["dc.contributor.author","Erlmann, Nora"],["dc.contributor.author","Schnetger, Bernhard"],["dc.contributor.author","Badewien, Thomas H."],["dc.contributor.author","Engelen, Bert"],["dc.date.accessioned","2020-04-28T12:41:52Z"],["dc.date.available","2020-04-28T12:41:52Z"],["dc.date.issued","2017"],["dc.description.abstract","By now, only limited information on the Roseobacter group thriving at the seafloor is available. Hence, the current study was conducted to determine their abundance and diversity within Pacific sediments along the 180° meridian. We hypothesize a distinct biogeographical distribution of benthic members of the Roseobacter group linked to nutrient availability within the sediments and productivity of the water column. Lowest cell numbers were counted at the edge of the south Pacific gyre and within the north Pacific gyre followed by an increase to the north with maximum values in the highly productive Bering Sea. Specific quantification of the Roseobacter group revealed on average a relative abundance of 1.7 and 6.3% as determined by catalyzed reported deposition-fluorescence in situ hybridization (CARD-FISH) and quantitative PCR (qPCR), respectively. Corresponding Illumina tag sequencing of 16S rRNA genes and 16S rRNA transcripts showed different compositions containing on average 0.7 and 0.9% Roseobacter-affiliated OTUs of the DNA- and RNA-based communities. These OTUs were mainly assigned to uncultured members of the Roseobacter group. Among those with cultured representatives, Sedimentitalea and Sulfitobacter made up the largest proportions. The different oceanic provinces with low nutrient content such as both ocean gyres were characterized by specific communities of the Roseobacter group, distinct from those of the more productive Pacific subarctic region and the Bering Sea. However, linking the community structure to specific metabolic processes at the seafloor is hampered by the dominance of so-far uncultured members of the Roseobacter group, indicating a diversity that has yet to be explored."],["dc.identifier.doi","10.3389/fmicb.2017.02550"],["dc.identifier.pmid","29326679"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/64451"],["dc.language.iso","en"],["dc.relation.issn","1664-302X"],["dc.title","The Biogeographical Distribution of Benthic Roseobacter Group Members along a Pacific Transect Is Structured by Nutrient Availability within the Sediments and Primary Production in Different Oceanic Provinces"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.artnumber","S-895"],["dc.bibliographiccitation.firstpage","S-895"],["dc.bibliographiccitation.issue","6"],["dc.bibliographiccitation.journal","Gastroenterology"],["dc.bibliographiccitation.volume","156"],["dc.contributor.author","Coffey, Michael J."],["dc.contributor.author","Nielsen, Shaun"],["dc.contributor.author","Wemheuer, Bernd"],["dc.contributor.author","Garg, Millie"],["dc.contributor.author","Needham, Bronwen"],["dc.contributor.author","Jaffe, Adam"],["dc.contributor.author","Thomas, Torsten"],["dc.contributor.author","Ooi, Chee Y."],["dc.date.accessioned","2020-04-28T12:40:19Z"],["dc.date.available","2020-04-28T12:40:19Z"],["dc.date.issued","2019"],["dc.identifier.doi","10.1016/S0016-5085(19)39210-8"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/64439"],["dc.language.iso","en"],["dc.relation.issn","0016-5085"],["dc.title","Mo1947 – Taxonomic and Functional Intestinal Dysbiosis in Children with Cystic Fibrosis"],["dc.type","journal_article"],["dc.type.internalPublication","unknown"],["dspace.entity.type","Publication"]]