Wemheuer, Bernd

[["dc.bibliographiccitation.firstpage","1"],["dc.bibliographiccitation.journal","Basic and Applied Ecology"],["dc.bibliographiccitation.lastpage","12"],["dc.bibliographiccitation.volume","49"],["dc.contributor.author","Tiede, Julia"],["dc.contributor.author","Diepenbruck, Melanie"],["dc.contributor.author","Gadau, Jürgen"],["dc.contributor.author","Wemheuer, Bernd"],["dc.contributor.author","Daniel, Rolf"],["dc.contributor.author","Scherber, Christoph"],["dc.date.accessioned","2021-04-14T08:30:12Z"],["dc.date.available","2021-04-14T08:30:12Z"],["dc.date.issued","2020"],["dc.identifier.doi","10.1016/j.baae.2020.09.004"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/83147"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-399"],["dc.relation.issn","1439-1791"],["dc.title","Seasonal variation in the diet of the serotine bat (Eptesicus serotinus): A high-resolution analysis using DNA metabarcoding"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.issue","5"],["dc.bibliographiccitation.journal","Genome Announcements"],["dc.bibliographiccitation.volume","6"],["dc.contributor.author","Wemheuer, Franziska"],["dc.contributor.author","Hollensteiner, Jacqueline"],["dc.contributor.author","Poehlein, Anja"],["dc.contributor.author","Liesegang, Heiko"],["dc.contributor.author","Daniel, Rolf"],["dc.contributor.author","Wemheuer, Bernd"],["dc.date.accessioned","2020-04-28T12:41:35Z"],["dc.date.available","2020-04-28T12:41:35Z"],["dc.date.issued","2018"],["dc.description.abstract","Bacillus mycoides GM6LP is an endophyte isolated from plant tissues of Lolium perenne L. Here, we report its draft genome sequence (6.2 Mb), which contains 96 contigs and 6,129 protein-coding genes. Knowledge about its genome will enable us to evaluate the potential use of GM6LP as a plant growth-promoting bacterium."],["dc.identifier.doi","10.1128/genomeA.00011-18"],["dc.identifier.eissn","2169-8287"],["dc.identifier.pmid","29437086"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/64449"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-354"],["dc.relation.issn","2169-8287"],["dc.title","Draft Genome Sequence of the Endophyte Bacillus mycoides Strain GM6LP Isolated from Lolium perenne"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","13"],["dc.bibliographiccitation.lastpage","21"],["dc.bibliographiccitation.seriesnr","2555"],["dc.contributor.author","Hollensteiner, Jacqueline"],["dc.contributor.author","Wemheuer, Franziska"],["dc.contributor.author","Schneider, Dominik"],["dc.contributor.author","Pfeiffer, Birgit"],["dc.contributor.author","Wemheuer, Bernd"],["dc.contributor.editor","Streit, Wolfgang R."],["dc.contributor.editor","Daniel, Rolf"],["dc.date.accessioned","2022-11-01T10:17:28Z"],["dc.date.available","2022-11-01T10:17:28Z"],["dc.date.issued","2023"],["dc.identifier.doi","10.1007/978-1-0716-2795-2_2"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/116819"],["dc.notes.intern","DOI-Import GROB-605"],["dc.publisher","Springer US"],["dc.publisher.place","New York, NY"],["dc.relation.crisseries","Methods in Molecular Biology"],["dc.relation.eisbn","978-1-0716-2795-2"],["dc.relation.isbn","978-1-0716-2794-5"],["dc.relation.ispartof","Metagenomics : Methods and Protocols"],["dc.title","Extraction of Total DNA and RNA from Marine Filter Samples and Generation of a Universal cDNA as Universal Template for Marker Gene Studies"],["dc.type","book_chapter"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.issue","4"],["dc.bibliographiccitation.journal","Genome Announcements"],["dc.bibliographiccitation.volume","6"],["dc.contributor.author","Poehlein, Anja"],["dc.contributor.author","Hollensteiner, Jacqueline"],["dc.contributor.author","Granzow, Sandra"],["dc.contributor.author","Wemheuer, Bernd"],["dc.contributor.author","Vidal, Stefan"],["dc.contributor.author","Wemheuer, Franziska"],["dc.date.accessioned","2020-12-10T18:37:01Z"],["dc.date.available","2020-12-10T18:37:01Z"],["dc.date.issued","2018"],["dc.description.abstract","Paenibacillus amylolyticus strain GM1FR is an endophyte isolated from aerial plant tissues of Festuca rubra L. Here, we report the draft genome sequence (7.3 Mb) of GM1FR containing 6,241 protein-coding genes, some of which are potentially involved in plant growth promotion and biocontrol."],["dc.identifier.doi","10.1128/genomeA.01516-17"],["dc.identifier.eissn","2169-8287"],["dc.identifier.pmid","29371353"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/76813"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-354"],["dc.relation.issn","2169-8287"],["dc.title","First Insights into the Draft Genome Sequence of the Endophyte Paenibacillus amylolyticus Strain GM1FR, Isolated from Festuca rubra L."],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","102094"],["dc.bibliographiccitation.journal","Aquacultural Engineering"],["dc.bibliographiccitation.volume","90"],["dc.contributor.author","Hüpeden, Jennifer"],["dc.contributor.author","Wemheuer, Bernd"],["dc.contributor.author","Indenbirken, Daniela"],["dc.contributor.author","Schulz, Carsten"],["dc.contributor.author","Spieck, Eva"],["dc.date.accessioned","2021-04-14T08:24:38Z"],["dc.date.available","2021-04-14T08:24:38Z"],["dc.date.issued","2020"],["dc.identifier.doi","10.1016/j.aquaeng.2020.102094"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/81366"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-399"],["dc.relation.issn","0144-8609"],["dc.title","Taxonomic and functional profiling of nitrifying biofilms in freshwater, brackish and marine RAS biofilters"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.issue","13"],["dc.bibliographiccitation.journal","Genome Announcements"],["dc.bibliographiccitation.volume","5"],["dc.contributor.author","Wemheuer, Franziska"],["dc.contributor.author","Hollensteiner, Jacqueline"],["dc.contributor.author","Poehlein, Anja"],["dc.contributor.author","Granzow, Sandra"],["dc.contributor.author","Daniel, Rolf"],["dc.contributor.author","Vidal, Stefan"],["dc.contributor.author","Wemheuer, Bernd"],["dc.date.accessioned","2020-12-10T18:36:53Z"],["dc.date.available","2020-12-10T18:36:53Z"],["dc.date.issued","2017"],["dc.description.abstract","Pseudomonas putida GM4FR is an endophytic bacterium isolated from aerial plant tissues of Festuca rubra L. Functional annotation of the draft genome (7.1 Mb) revealed 6,272 predicted protein-encoding genes. The genome provides insights into the biocontrol and plant growth-promoting potential of P. putida GM4FR."],["dc.identifier.doi","10.1128/genomeA.00086-17"],["dc.identifier.eissn","2169-8287"],["dc.identifier.pmid","28360162"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/76772"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-354"],["dc.relation.issn","2169-8287"],["dc.title","Draft Genome Sequence of Pseudomonas putida Strain GM4FR, an Endophytic Bacterium Isolated from Festuca rubra L"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.artnumber","2550"],["dc.bibliographiccitation.journal","Frontiers in Microbiology"],["dc.bibliographiccitation.volume","8"],["dc.contributor.author","Pohlner, Marion"],["dc.contributor.author","Degenhardt, Julius"],["dc.contributor.author","von Hoyningen-Huene, Avril J. E."],["dc.contributor.author","Wemheuer, Bernd"],["dc.contributor.author","Erlmann, Nora"],["dc.contributor.author","Schnetger, Bernhard"],["dc.contributor.author","Badewien, Thomas H."],["dc.contributor.author","Engelen, Bert"],["dc.date.accessioned","2020-04-28T12:41:52Z"],["dc.date.available","2020-04-28T12:41:52Z"],["dc.date.issued","2017"],["dc.description.abstract","By now, only limited information on the Roseobacter group thriving at the seafloor is available. Hence, the current study was conducted to determine their abundance and diversity within Pacific sediments along the 180° meridian. We hypothesize a distinct biogeographical distribution of benthic members of the Roseobacter group linked to nutrient availability within the sediments and productivity of the water column. Lowest cell numbers were counted at the edge of the south Pacific gyre and within the north Pacific gyre followed by an increase to the north with maximum values in the highly productive Bering Sea. Specific quantification of the Roseobacter group revealed on average a relative abundance of 1.7 and 6.3% as determined by catalyzed reported deposition-fluorescence in situ hybridization (CARD-FISH) and quantitative PCR (qPCR), respectively. Corresponding Illumina tag sequencing of 16S rRNA genes and 16S rRNA transcripts showed different compositions containing on average 0.7 and 0.9% Roseobacter-affiliated OTUs of the DNA- and RNA-based communities. These OTUs were mainly assigned to uncultured members of the Roseobacter group. Among those with cultured representatives, Sedimentitalea and Sulfitobacter made up the largest proportions. The different oceanic provinces with low nutrient content such as both ocean gyres were characterized by specific communities of the Roseobacter group, distinct from those of the more productive Pacific subarctic region and the Bering Sea. However, linking the community structure to specific metabolic processes at the seafloor is hampered by the dominance of so-far uncultured members of the Roseobacter group, indicating a diversity that has yet to be explored."],["dc.identifier.doi","10.3389/fmicb.2017.02550"],["dc.identifier.pmid","29326679"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/64451"],["dc.language.iso","en"],["dc.relation.issn","1664-302X"],["dc.title","The Biogeographical Distribution of Benthic Roseobacter Group Members along a Pacific Transect Is Structured by Nutrient Availability within the Sediments and Primary Production in Different Oceanic Provinces"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.artnumber","S-895"],["dc.bibliographiccitation.firstpage","S-895"],["dc.bibliographiccitation.issue","6"],["dc.bibliographiccitation.journal","Gastroenterology"],["dc.bibliographiccitation.volume","156"],["dc.contributor.author","Coffey, Michael J."],["dc.contributor.author","Nielsen, Shaun"],["dc.contributor.author","Wemheuer, Bernd"],["dc.contributor.author","Garg, Millie"],["dc.contributor.author","Needham, Bronwen"],["dc.contributor.author","Jaffe, Adam"],["dc.contributor.author","Thomas, Torsten"],["dc.contributor.author","Ooi, Chee Y."],["dc.date.accessioned","2020-04-28T12:40:19Z"],["dc.date.available","2020-04-28T12:40:19Z"],["dc.date.issued","2019"],["dc.identifier.doi","10.1016/S0016-5085(19)39210-8"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/64439"],["dc.language.iso","en"],["dc.relation.issn","0016-5085"],["dc.title","Mo1947 – Taxonomic and Functional Intestinal Dysbiosis in Children with Cystic Fibrosis"],["dc.type","journal_article"],["dc.type.internalPublication","unknown"],["dspace.entity.type","Publication"]]

[["dc.contributor.author","Daniel, Rolf"],["dc.contributor.author","Simon, Meinhard"],["dc.contributor.author","Wemheuer, Bernd"],["dc.date.accessioned","2020-03-12T08:55:52Z"],["dc.date.available","2020-03-12T08:55:52Z"],["dc.date.issued","2018"],["dc.description.abstract","Marine bacteria and archaea are key players in the biogeochemical cycling of nitrogen, carbon, and other elements. One important lineage of marine bacteria is the Roseobacter group. Members of this clade are the most abundant bacteria in marine ecosystems constituting up to 25% of the marine bacterioplankton. They have been detected in various marine habitats from coastal regions to deep-sea sediments and from polar regions to tropical latitudes. These bacteria are physiologically and genetically very versatile. Utilization of several organic and inorganic compounds, sulfur oxidation, aerobic anoxygenic photosynthesis, carbon monoxide oxidation, DMSP demethylation, and production of secondary metabolites are some of the important functional traits found in this clade. Moreover, several isolates are available allowing in-depth analysis of physiological and genetic characteristics. Although the Roseobacter group has been intensively studied in recent years, our understanding of its ecological contributions and the evolutionary processes shaping the genomes of this clade is still rather limited."],["dc.identifier.doi","10.3389/978-2-88945-538-6"],["dc.identifier.isbn","978-2-88945-538-6"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/63325"],["dc.language.iso","en"],["dc.publisher","Frontiers Media SA"],["dc.title","Molecular ecology and genetic diversity of the Roseobacter clade"],["dc.type","book"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","111"],["dc.bibliographiccitation.issue","1"],["dc.bibliographiccitation.journal","The Ocular Surface"],["dc.bibliographiccitation.lastpage","118"],["dc.bibliographiccitation.volume","17"],["dc.contributor.author","Ozkan, Jerome"],["dc.contributor.author","Willcox, Mark"],["dc.contributor.author","Wemheuer, Bernd"],["dc.contributor.author","Wilcsek, Geoff"],["dc.contributor.author","Coroneo, Minas"],["dc.contributor.author","Thomas, Torsten"],["dc.date.accessioned","2020-03-12T08:48:50Z"],["dc.date.available","2020-03-12T08:48:50Z"],["dc.date.issued","2019"],["dc.description.abstract","The human eye is composed of numerous microhabitats. The aim of this study was to understand the communality and differences in the microbiomes of various regions of the eye."],["dc.identifier.doi","10.1016/j.jtos.2018.11.005"],["dc.identifier.pmid","30445178"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/63322"],["dc.language.iso","en"],["dc.relation.eissn","1937-5913"],["dc.relation.issn","1542-0124"],["dc.title","Biogeography of the human ocular microbiota"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]