Czerny, Claus-Peter

[["dc.bibliographiccitation.firstpage","23"],["dc.bibliographiccitation.journal","Journal of Clinical Virology"],["dc.bibliographiccitation.lastpage","27"],["dc.bibliographiccitation.volume","106"],["dc.contributor.author","Hansen, Sören"],["dc.contributor.author","Faye, Oumar"],["dc.contributor.author","Sanabani, Sabri S."],["dc.contributor.author","Faye, Martin"],["dc.contributor.author","Böhlken-Fascher, Susanne"],["dc.contributor.author","Faye, Ousmane"],["dc.contributor.author","Sall, Amadou A."],["dc.contributor.author","Bekaert, Michaël"],["dc.contributor.author","Weidmann, Manfred"],["dc.contributor.author","Czerny, Claus-Peter"],["dc.contributor.author","Abd El Wahed, Ahmed"],["dc.date.accessioned","2020-12-10T14:25:03Z"],["dc.date.available","2020-12-10T14:25:03Z"],["dc.date.issued","2018"],["dc.identifier.doi","10.1016/j.jcv.2018.07.001"],["dc.identifier.issn","1386-6532"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/72419"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-354"],["dc.title","Combination random isothermal amplification and nanopore sequencing for rapid identification of the causative agent of an outbreak"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","117"],["dc.bibliographiccitation.issue","3"],["dc.bibliographiccitation.journal","Veterinary Sciences"],["dc.bibliographiccitation.volume","7"],["dc.contributor.author","Roller, Marco"],["dc.contributor.author","Hansen, Sören"],["dc.contributor.author","Böhlken-Fascher, Susanne"],["dc.contributor.author","Knauf-Witzens, Tobias"],["dc.contributor.author","Czerny, Claus-Peter"],["dc.contributor.author","Goethe, Ralph"],["dc.contributor.author","Abd El Wahed, Ahmed"],["dc.date.accessioned","2021-04-14T08:32:27Z"],["dc.date.available","2021-04-14T08:32:27Z"],["dc.date.issued","2020"],["dc.identifier.doi","10.3390/vetsci7030117"],["dc.identifier.purl","https://resolver.sub.uni-goettingen.de/purl?gs-1/17560"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/83927"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-399"],["dc.notes.intern","Merged from goescholar"],["dc.publisher","MDPI"],["dc.relation.eissn","2306-7381"],["dc.rights","CC BY 4.0"],["dc.rights.uri","http://creativecommons.org/licenses/by/4.0/"],["dc.title","Molecular and Serological Footprints of Mycobacterium avium Subspecies Infections in Zoo Animals"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.version","published_version"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","50"],["dc.bibliographiccitation.journal","Journal of Virological Methods"],["dc.bibliographiccitation.lastpage","53"],["dc.bibliographiccitation.volume","263"],["dc.contributor.author","Hansen, Sören"],["dc.contributor.author","Dill, Veronika"],["dc.contributor.author","Shalaby, Mohamed A."],["dc.contributor.author","Eschbaumer, Michael"],["dc.contributor.author","Böhlken-Fascher, Susanne"],["dc.contributor.author","Hoffmann, Bernd"],["dc.contributor.author","Czerny, Claus-Peter"],["dc.contributor.author","Abd El Wahed, Ahmed"],["dc.date.accessioned","2020-12-10T15:20:09Z"],["dc.date.available","2020-12-10T15:20:09Z"],["dc.date.issued","2019"],["dc.identifier.doi","10.1016/j.jviromet.2018.10.020"],["dc.identifier.issn","0166-0934"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/72571"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-354"],["dc.title","Serotyping of foot-and-mouth disease virus using oxford nanopore sequencing"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","123"],["dc.bibliographiccitation.lastpage","136"],["dc.bibliographiccitation.seriesnr","2142"],["dc.contributor.author","Hansen, Sören"],["dc.contributor.author","Faye, Oumar"],["dc.contributor.author","Sanabani, Sabri S."],["dc.contributor.author","Faye, Martin"],["dc.contributor.author","Böhlken-Fascher, Susanne"],["dc.contributor.author","Faye, Ousmane"],["dc.contributor.author","Sall, Amadou Alpha"],["dc.contributor.author","Bekaert, Michaël"],["dc.contributor.author","Weidmann, Manfred"],["dc.contributor.author","Czerny, Claus-Peter"],["dc.contributor.author","Abd El Wahed, Ahmed"],["dc.contributor.editor","Kobinger, Gary"],["dc.contributor.editor","Racine, Trina"],["dc.date.accessioned","2021-06-02T10:44:21Z"],["dc.date.available","2021-06-02T10:44:21Z"],["dc.date.issued","2020"],["dc.identifier.doi","10.1007/978-1-0716-0581-3_11"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/87005"],["dc.notes.intern","DOI-Import GROB-425"],["dc.publisher","Springer US"],["dc.publisher.place","New York, NY"],["dc.relation.crisseries","Methods in Molecular Biology"],["dc.relation.eisbn","978-1-0716-0581-3"],["dc.relation.isbn","978-1-0716-0580-6"],["dc.relation.ispartof","Methods in Molecular Biology"],["dc.relation.ispartof","Zika Virus : Methods and Protocols"],["dc.relation.ispartofseries","Methods in Molecular Biology; 2142"],["dc.title","Zika Virus Amplification Using Strand Displacement Isothermal Method and Sequencing Using Nanopore Technology"],["dc.type","book_chapter"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.artnumber","3648"],["dc.bibliographiccitation.issue","1"],["dc.bibliographiccitation.journal","Scientific Reports"],["dc.bibliographiccitation.volume","9"],["dc.contributor.author","Hansen, Sören"],["dc.contributor.author","Hotop, Sven-Kevin"],["dc.contributor.author","Faye, Oumar"],["dc.contributor.author","Ndiaye, Oumar"],["dc.contributor.author","Böhlken-Fascher, Susanne"],["dc.contributor.author","Pessôa, Rodrigo"],["dc.contributor.author","Hufert, Frank"],["dc.contributor.author","Stahl-Hennig, Christiane"],["dc.contributor.author","Frank, Ronald"],["dc.contributor.author","Czerny, Claus-Peter"],["dc.contributor.author","Schmidt-Chanasit, Jonas"],["dc.contributor.author","Sanabani, Sabri S."],["dc.contributor.author","Sall, Amadou A."],["dc.contributor.author","Niedrig, Matthias"],["dc.contributor.author","Brönstrup, Mark"],["dc.contributor.author","Fritz, Hans-Joachim"],["dc.contributor.author","Abd El Wahed, Ahmed"],["dc.date.accessioned","2019-07-09T11:50:13Z"],["dc.date.available","2019-07-09T11:50:13Z"],["dc.date.issued","2019"],["dc.description.abstract","Zika virus (ZIKV) is a mosquito-borne flavivirus. Homologous proteins of different flaviviruses display high degrees of sequence identity, especially within subgroups. This leads to extensive immunological cross-reactivity and corresponding problems for developing a ZIKV-specific serological assay. In this study, peptide microarrays were employed to identify individual ZIKV antibody targets with promise in differential diagnosis. A total of 1643 overlapping oligopeptides were synthesized and printed onto glass slides. Together, they encompass the full amino acid sequences of ZIKV proteomes of African, Brazilian, USA, and French Polynesian origins. The resulting ZIKV scanning microarray chips were used to screen three pools of sera from recent Zika outbreaks in Senegal and Cape Verde, in Brazil, and from overseas travelers returning to the EU. Together with a mixed pool of well characterized, archived sera of patients suffering from infections by dengue, yellow fever, tick-borne encephalitis, and West Nile viruses, a total of 42 sera went into the study. Sixty-eight antibody target regions were identified. Most of which were hitherto unknown. Alignments and sequence comparisons revealed 13 of which could be classified as bona fide ZIKV-specific. These identified antibody target regions constitute a founding set of analytical tools for serological discrimination of ZIKV from other flaviviruses."],["dc.identifier.doi","10.1038/s41598-019-40224-2"],["dc.identifier.pmid","30842564"],["dc.identifier.purl","https://resolver.sub.uni-goettingen.de/purl?gs-1/15882"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/59723"],["dc.language.iso","en"],["dc.notes.intern","Merged from goescholar"],["dc.relation.issn","2045-2322"],["dc.rights","CC BY 4.0"],["dc.rights.uri","https://creativecommons.org/licenses/by/4.0"],["dc.subject.ddc","630"],["dc.title","Diagnosing Zika virus infection against a background of other flaviviruses: Studies in high resolution serological analysis."],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.version","published_version"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","126759"],["dc.bibliographiccitation.journal","Food Chemistry"],["dc.bibliographiccitation.volume","322"],["dc.contributor.author","Kissenkötter, Jonas"],["dc.contributor.author","Böhlken-Fascher, Susanne"],["dc.contributor.author","Forrest, Matthew S."],["dc.contributor.author","Piepenburg, Olaf"],["dc.contributor.author","Czerny, Claus-Peter"],["dc.contributor.author","Abd El Wahed, Ahmed"],["dc.date.accessioned","2020-12-10T14:24:04Z"],["dc.date.available","2020-12-10T14:24:04Z"],["dc.date.issued","2020"],["dc.identifier.doi","10.1016/j.foodchem.2020.126759"],["dc.identifier.issn","0308-8146"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/72122"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-354"],["dc.title","Recombinase polymerase amplification assays for the identification of pork and horsemeat"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","29"],["dc.bibliographiccitation.journal","Analytical Biochemistry"],["dc.bibliographiccitation.lastpage","33"],["dc.bibliographiccitation.volume","544"],["dc.contributor.author","Kissenkötter, Jonas"],["dc.contributor.author","Hansen, Sören"],["dc.contributor.author","Böhlken-Fascher, Susanne"],["dc.contributor.author","Ademowo, Olusegun George"],["dc.contributor.author","Oyinloye, Oladapo Elijah"],["dc.contributor.author","Bakarey, Adeleye Solomon"],["dc.contributor.author","Dobler, Gerhard"],["dc.contributor.author","Tappe, Dennis"],["dc.contributor.author","Patel, Pranav"],["dc.contributor.author","Czerny, Claus-Peter"],["dc.contributor.author","Abd El Wahed, Ahmed"],["dc.date.accessioned","2020-12-10T14:14:51Z"],["dc.date.available","2020-12-10T14:14:51Z"],["dc.date.issued","2018"],["dc.identifier.doi","10.1016/j.ab.2017.12.018"],["dc.identifier.issn","0003-2697"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/71522"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-354"],["dc.title","Development of a pan-rickettsial molecular diagnostic test based on recombinase polymerase amplification assay"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.artnumber","36"],["dc.bibliographiccitation.issue","2"],["dc.bibliographiccitation.journal","Diagnostics (Basel, Switzerland)"],["dc.bibliographiccitation.volume","9"],["dc.contributor.author","Hansen, Sören"],["dc.contributor.author","Roller, Marco"],["dc.contributor.author","Alslim, Lamia M. A."],["dc.contributor.author","Böhlken-Fascher, Susanne"],["dc.contributor.author","Fechner, Kim"],["dc.contributor.author","Czerny, Claus-Peter"],["dc.contributor.author","Abd El Wahed, Ahmed"],["dc.date.accessioned","2019-07-29T15:02:58Z"],["dc.date.available","2019-07-29T15:02:58Z"],["dc.date.issued","2019"],["dc.description.abstract","The rapid identification of Mycobacteriumavium subspecies paratuberculosis (MAP) infected animals within the herd is essential for preventing the spread of the disease as well as avoiding human exposure. Although culture is seen as the gold standard, there are various molecular assays available i.e., polymerase chain reaction (PCR) or isothermal amplification technique (recombinase polymerase amplification (RPA)) for the detection of MAP. The accuracy of the molecular assays is highly dependent on the DNA extraction method. In order to establish a rapid point of need system for the detection of MAP DNA from stool samples, we developed a rapid DNA extraction protocol (MAP DNA SpeedXtract) specified for use in combination with the RPA. The whole procedure from \"sample in\" to \"result out\" was conducted in a mobile suitcase laboratory. The DNA extraction is based on reverse purification by magnetic beads, which reduces the required technical demand. The MAP DNA SpeedXtract was performed within 25 min and only three pipetting steps were needed. The amplification and detection time were 20 min in RPA. The sensitivity and specificity of the developed protocol in comparison with the lab-based silica membrane column extraction and real-time PCR were 90.9% (n = 22) and 100% (n = 23), respectively. In conclusion, we established a rapid and reliable protocol for the extraction and detection of MAP DNA. All reagents are cold chain independent. The entire setup is ideal for point of need identification of MAP infected cases."],["dc.identifier.doi","10.3390/diagnostics9020036"],["dc.identifier.pmid","30934956"],["dc.identifier.purl","https://resolver.sub.uni-goettingen.de/purl?gs-1/16310"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/62152"],["dc.language.iso","en"],["dc.notes.intern","Merged from goescholar"],["dc.publisher","MDPI"],["dc.relation.eissn","2075-4418"],["dc.relation.issn","2075-4418"],["dc.rights","CC BY 4.0"],["dc.rights.uri","https://creativecommons.org/licenses/by/4.0/"],["dc.title","Development of Rapid Extraction Method of Mycobacterium avium Subspecies paratuberculosis DNA from Bovine Stool Samples"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.version","published_version"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","41"],["dc.bibliographiccitation.issue","1"],["dc.bibliographiccitation.journal","Diagnostic Microbiology and Infectious Disease"],["dc.bibliographiccitation.lastpage","45"],["dc.bibliographiccitation.volume","95"],["dc.contributor.author","Davi, Saskia Dede"],["dc.contributor.author","Kissenkötter, Jonas"],["dc.contributor.author","Faye, Martin"],["dc.contributor.author","Böhlken-Fascher, Susanne"],["dc.contributor.author","Stahl-Hennig, Christiane"],["dc.contributor.author","Faye, Oumar"],["dc.contributor.author","Faye, Ousmane"],["dc.contributor.author","Sall, Amadou A."],["dc.contributor.author","Weidmann, Manfred"],["dc.contributor.author","Ademowo, Olusegun George"],["dc.contributor.author","Hufert, Frank T."],["dc.contributor.author","Czerny, Claus-Peter"],["dc.contributor.author","Abd El Wahed, Ahmed"],["dc.date.accessioned","2020-12-10T14:23:27Z"],["dc.date.available","2020-12-10T14:23:27Z"],["dc.date.issued","2019"],["dc.identifier.doi","10.1016/j.diagmicrobio.2019.03.015"],["dc.identifier.issn","0732-8893"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/71926"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-354"],["dc.title","Recombinase polymerase amplification assay for rapid detection of Monkeypox virus"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]