Now showing 1 - 10 of 73
  • 2021Journal Article Research Paper
    [["dc.bibliographiccitation.firstpage","e0256639"],["dc.bibliographiccitation.issue","8"],["dc.bibliographiccitation.journal","PLoS One"],["dc.bibliographiccitation.volume","16"],["dc.contributor.author","von Hoyningen-Huene, Avril J. E."],["dc.contributor.author","Schlotthauer, Tabea J."],["dc.contributor.author","Schneider, Dominik"],["dc.contributor.author","Poehlein, Anja"],["dc.contributor.author","Daniel, Rolf"],["dc.date.accessioned","2021-12-01T09:24:00Z"],["dc.date.available","2021-12-01T09:24:00Z"],["dc.date.issued","2021"],["dc.description.abstract","Pontibacillus sp. ALD_SL1 and Psychroflexus sp. ALD_RP9 are two novel bacterial isolates from mangrove sediment and a moderately hypersaline pool on the Aldabra Atoll, Seychelles. The isolates represent two novel species were characterised physiologically and genomically. Pontibacillus sp. ALD_SL1 is a facultatively anaerobic yellow, motile, rod-shaped Gram-positive, which grows optimally at a NaCl concentration of 11%, pH 7 and 28°C. It is the third facultatively anaerobic member of the genus Pontibacillus . The organism gains energy through the fermentation of pyruvate to acetate and ethanol under anaerobic conditions. The genome is the first among Pontibacillus that harbours a megaplasmid. Psychroflexus sp. ALD_RP9 is an aerobic heterotroph, which can generate energy by employing bacteriorhodopsins. It forms Gram-negative, orange, non-motile rods. The strain grows optimally at NaCl concentrations of 10%, pH 6.5–8 and 20°C. The Psychroflexus isolate tolerated pH conditions up to 10.5, which is the highest pH tolerance currently recorded for the genus. Psychroflexus sp. ALD_RP9 taxonomically belongs to the clade with the smallest genomes. Both isolates show extensive adaptations to their saline environments yet utilise different mechanisms to ensure survival."],["dc.description.sponsorship","Open-Access-Publikationsfonds 2021"],["dc.identifier.doi","10.1371/journal.pone.0256639"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/94818"],["dc.language.iso","en"],["dc.notes.intern","DOI-Import GROB-478"],["dc.relation.eissn","1932-6203"],["dc.relation.orgunit","Abteilung Genomische & Angewandte Mikrobiologie"],["dc.rights","CC BY 4.0"],["dc.title","Pontibacillus sp. ALD_SL1 and Psychroflexus sp. ALD_RP9, two novel moderately halophilic bacteria isolated from sediment and water from the Aldabra Atoll, Seychelles"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.subtype","original_ja"],["dc.type.version","published_version"],["dspace.entity.type","Publication"]]
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  • 2016Journal Article
    [["dc.bibliographiccitation.artnumber","81"],["dc.bibliographiccitation.journal","Standards in Genomic Sciences"],["dc.bibliographiccitation.volume","11"],["dc.contributor.author","Giebel, Helge-Ansgar"],["dc.contributor.author","Klotz, Franziska"],["dc.contributor.author","Voget, Sonja"],["dc.contributor.author","Poehlein, Anja"],["dc.contributor.author","Grosser, Katrin"],["dc.contributor.author","Teske, Andreas"],["dc.contributor.author","Brinkhoff, Thorsten"],["dc.date.accessioned","2018-11-07T10:07:04Z"],["dc.date.available","2018-11-07T10:07:04Z"],["dc.date.issued","2016"],["dc.description.abstract","The marine alphaproteobacterium strain O3.65 was isolated from an enrichment culture of surface seawater contaminated with weathered oil (slicks) from the Deepwater Horizon (DWH) oil spill and belongs to the ubiquitous, diverse and ecological relevant Roseobacter group within the Rhodobacteraceae. Here, we present a preliminary set of physiological features of strain O3.65 and a description and annotation of its draft genome sequence. Based on our data we suggest potential ecological roles of the isolate in the degradation of crude oil within the network of the oil-enriched microbial community. The draft genome comprises 4,852,484 bp with 4,591 protein-coding genes and 63 RNA genes. Strain O3.65 utilizes pentoses, hexoses, disaccharides and amino acids as carbon and energy source and is able to grow on several hydroxylated and substituted aromatic compounds. Based on 16S rRNA gene comparison the closest described and validated strain is Phaeobacter inhibens DSM 17395, however, strain O3.65 is lacking several phenotypic and genomic characteristics specific for the genus Phaeobacter. Phylogenomic analyses based on the whole genome support extensive genetic exchange of strain O3.65 with members of the genus Ruegeria, potentially by using the secretion system type IV. Our physiological observations are consistent with the genomic and phylogenomic analyses and support that strain O3.65 is a novel species of a new genus within the Rhodobacteraceae."],["dc.identifier.doi","10.1186/s40793-016-0201-7"],["dc.identifier.isi","000385317900001"],["dc.identifier.pmid","27777651"],["dc.identifier.purl","https://resolver.sub.uni-goettingen.de/purl?gs-1/14037"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/39215"],["dc.notes.intern","Merged from goescholar"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.publisher","Biomed Central Ltd"],["dc.relation.issn","1944-3277"],["dc.rights","CC BY 4.0"],["dc.rights.uri","https://creativecommons.org/licenses/by/4.0"],["dc.title","Draft genome sequence of the marine Rhodobacteraceae strain O3.65, cultivated from oil-polluted seawater of the Deepwater Horizon oil spill"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.status","published"],["dc.type.version","published_version"],["dspace.entity.type","Publication"]]
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  • 2021Journal Article
    [["dc.bibliographiccitation.firstpage","2648"],["dc.bibliographiccitation.issue","5"],["dc.bibliographiccitation.journal","Environmental Microbiology"],["dc.bibliographiccitation.lastpage","2658"],["dc.bibliographiccitation.volume","23"],["dc.contributor.author","Trifunović, Dragan"],["dc.contributor.author","Moon, Jimyung"],["dc.contributor.author","Poehlein, Anja"],["dc.contributor.author","Daniel, Rolf"],["dc.contributor.author","Müller, Volker"],["dc.date.accessioned","2021-06-01T09:41:59Z"],["dc.date.available","2021-06-01T09:41:59Z"],["dc.date.issued","2021"],["dc.description.abstract","Summary More than 2 million tons of glycerol are produced during industrial processes each year and, therefore, glycerol is an inexpensive feedstock to produce biocommodities by bacterial fermentation. Acetogenic bacteria are interesting production platforms and there have been few reports in the literature on glycerol utilization by this ecophysiologically important group of strictly anaerobic bacteria. Here, we show that the model acetogen Acetobacterium woodii DSM1030 is able to grow on glycerol, but contrary to expectations, only for 2–3 transfers. Transcriptome analysis revealed the expression of the pdu operon encoding a propanediol dehydratase along with genes encoding bacterial microcompartments. Deletion of pduAB led to a stable growth of A. woodii on glycerol, consistent with the hypothesis that the propanediol dehydratase also acts on glycerol leading to a toxic end‐product. Glycerol is oxidized to acetate and the reducing equivalents are reoxidized by reducing CO2 in the Wood–Ljungdahl pathway, leading to an additional acetate. The possible oxidation product of glycerol, dihydroxyacetone (DHA), also served as carbon and energy source for A. woodii and growth was stably maintained on that compound. DHA oxidation was also coupled to CO2 reduction. Based on transcriptome data and enzymatic analysis we present the first metabolic and bioenergetic schemes for glycerol and DHA utilization in A. woodii."],["dc.identifier.doi","10.1111/1462-2920.15503"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/85099"],["dc.language.iso","en"],["dc.notes.intern","DOI-Import GROB-425"],["dc.publisher","John Wiley \\u0026 Sons, Inc."],["dc.relation.eissn","1462-2920"],["dc.relation.issn","1462-2912"],["dc.rights","This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited."],["dc.title","Growth of the acetogenic bacterium Acetobacterium woodii on glycerol and dihydroxyacetone"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]
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  • 2021Journal Article
    [["dc.bibliographiccitation.firstpage","1500"],["dc.bibliographiccitation.issue","7"],["dc.bibliographiccitation.journal","Microorganisms"],["dc.bibliographiccitation.volume","9"],["dc.contributor.author","Salar-Vidal, Llanos"],["dc.contributor.author","Achermann, Yvonne"],["dc.contributor.author","Aguilera-Correa, John-Jairo"],["dc.contributor.author","Poehlein, Anja"],["dc.contributor.author","Esteban, Jaime"],["dc.contributor.author","Brüggemann, Holger"],["dc.contributor.authorgroup","on behalf of the ESCMID Study Group for Implant-Associated Infections (ESGIAI)"],["dc.date.accessioned","2021-09-01T06:43:04Z"],["dc.date.available","2021-09-01T06:43:04Z"],["dc.date.issued","2021"],["dc.description.abstract","Cutibacterium acnes is a common cause of prosthetic joint infections (PJIs). The C. acnes population can be divided into six main phylotypes (IA1, IA2, IB, IC, II and III) that are associated with different clinical conditions and normal skin. A single-locus sequence typing (SLST) scheme can distinguish ten main SLST types: A-E (all IA1), F (IA2), G (IC), H (IB), K (II), L (III). We genome-sequenced and compared 16 strains of C. acnes isolated from healthy skin (n = 4) and PJIs (n = 12), including six PJI cases with a good outcome (four shoulder PJIs, one hip PJI, one knee PJI) and six with infection relapse (three shoulder PJIs, three hip PJIs). The sequenced strains belonged to four different phylotypes (IA1, IA2, IB and II) and seven different SLST types. All five type IB strains (all SLST type H1) were PJI isolates (three hip PJIs, two shoulder PJIs), and four of these caused infection relapse (three hip PJIs, one shoulder PJI). Isolates from PJI cases with a good outcome belonged to three different phylotypes (IA, IB, II). Interestingly, four strains (three strains from PJI cases with good outcome and one strain from healthy skin) contained a linear plasmid; these strains belonged to different SLST types (A1, C1, F4, H1) and were isolated in three different hospitals. This study suggests that type IB strains have the potential to cause infection relapse, in particular regarding hip PJIs. Moreover, our study revealed that strains belonging to the same SLST type can differ in their accessory genome in different geographic locations, indicative of microevolution."],["dc.description.abstract","Cutibacterium acnes is a common cause of prosthetic joint infections (PJIs). The C. acnes population can be divided into six main phylotypes (IA1, IA2, IB, IC, II and III) that are associated with different clinical conditions and normal skin. A single-locus sequence typing (SLST) scheme can distinguish ten main SLST types: A-E (all IA1), F (IA2), G (IC), H (IB), K (II), L (III). We genome-sequenced and compared 16 strains of C. acnes isolated from healthy skin (n = 4) and PJIs (n = 12), including six PJI cases with a good outcome (four shoulder PJIs, one hip PJI, one knee PJI) and six with infection relapse (three shoulder PJIs, three hip PJIs). The sequenced strains belonged to four different phylotypes (IA1, IA2, IB and II) and seven different SLST types. All five type IB strains (all SLST type H1) were PJI isolates (three hip PJIs, two shoulder PJIs), and four of these caused infection relapse (three hip PJIs, one shoulder PJI). Isolates from PJI cases with a good outcome belonged to three different phylotypes (IA, IB, II). Interestingly, four strains (three strains from PJI cases with good outcome and one strain from healthy skin) contained a linear plasmid; these strains belonged to different SLST types (A1, C1, F4, H1) and were isolated in three different hospitals. This study suggests that type IB strains have the potential to cause infection relapse, in particular regarding hip PJIs. Moreover, our study revealed that strains belonging to the same SLST type can differ in their accessory genome in different geographic locations, indicative of microevolution."],["dc.description.sponsorship","Fabrikant Vilhelm Pedersen og Hustrus Legat"],["dc.identifier.doi","10.3390/microorganisms9071500"],["dc.identifier.pii","microorganisms9071500"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/89211"],["dc.language.iso","en"],["dc.notes.intern","DOI-Import GROB-455"],["dc.publisher","MDPI"],["dc.relation.eissn","2076-2607"],["dc.rights","https://creativecommons.org/licenses/by/4.0/"],["dc.title","Genomic Analysis of Cutibacterium acnes Strains Isolated from Prosthetic Joint Infections"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]
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  • 2014Journal Article
    [["dc.bibliographiccitation.issue","5"],["dc.bibliographiccitation.journal","Genome announcements"],["dc.bibliographiccitation.volume","2"],["dc.contributor.author","Poehlein, Anja"],["dc.contributor.author","Krabben, Preben"],["dc.contributor.author","Dürre, Peter"],["dc.contributor.author","Daniel, Rolf"],["dc.date.accessioned","2015-10-12T14:49:01Z"],["dc.date.accessioned","2021-10-27T13:11:22Z"],["dc.date.available","2015-10-12T14:49:01Z"],["dc.date.available","2021-10-27T13:11:22Z"],["dc.date.issued","2014"],["dc.description.abstract","Clostridium saccharoperbutylacetonicum strain DSM 14923 is known as a butanol-producing bacterium. Various organic compounds such as glucose, fructose, sucrose, mannose, and cellobiose are fermented. The genome consists of one chromosome and one circular megaplasmid. C. saccharoperbutylacetonicum was used in industrial fermentation processes to produce the solvents acetone, butanol, and ethanol."],["dc.identifier.doi","10.1128/genomeA.01056-14"],["dc.identifier.fs","609807"],["dc.identifier.pmid","25323722"],["dc.identifier.purl","https://resolver.sub.uni-goettingen.de/purl?gs-1/12154"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/91590"],["dc.language.iso","en"],["dc.notes.intern","Migrated from goescholar"],["dc.relation.issn","2169-8287"],["dc.relation.orgunit","Fakultät für Biologie und Psychologie"],["dc.rights","CC BY 3.0"],["dc.rights.uri","https://creativecommons.org/licenses/by/3.0"],["dc.title","Complete Genome Sequence of the Solvent Producer Clostridium saccharoperbutylacetonicum Strain DSM 14923."],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.version","published_version"],["dspace.entity.type","Publication"]]
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  • 2014Journal Article
    [["dc.bibliographiccitation.artnumber","e106707"],["dc.bibliographiccitation.issue","9"],["dc.bibliographiccitation.journal","PLoS One"],["dc.bibliographiccitation.volume","9"],["dc.contributor.author","Ilmberger, Nele"],["dc.contributor.author","Güllert, Simon"],["dc.contributor.author","Dannenberg, Joana"],["dc.contributor.author","Rabausch, Ulrich"],["dc.contributor.author","Torres, Jeremy"],["dc.contributor.author","Wemheuer, Bernd"],["dc.contributor.author","Alawi, Malik"],["dc.contributor.author","Poehlein, Anja"],["dc.contributor.author","Chow, Jennifer"],["dc.contributor.author","Turaev, Dimitrij"],["dc.contributor.author","Rattei, Thomas"],["dc.contributor.author","Schmeisser, Christel"],["dc.contributor.author","Salomon, Jesper"],["dc.contributor.author","Olsen, Peter B."],["dc.contributor.author","Daniel, Rolf"],["dc.contributor.author","Grundhoff, Adam"],["dc.contributor.author","Borchert, Martin S."],["dc.contributor.author","Streit, Wolfgang R."],["dc.date.accessioned","2018-11-07T09:35:20Z"],["dc.date.available","2018-11-07T09:35:20Z"],["dc.date.issued","2014"],["dc.description.abstract","A phylogenetic and metagenomic study of elephant feces samples (derived from a three-weeks-old and a six-years-old Asian elephant) was conducted in order to describe the microbiota inhabiting this large land-living animal. The microbial diversity was examined via 16S rRNA gene analysis. We generated more than 44,000 GS-FLX+454 reads for each animal. For the baby elephant, 380 operational taxonomic units (OTUs) were identified at 97% sequence identity level; in the six-years-old animal, close to 3,000 OTUs were identified, suggesting high microbial diversity in the older animal. In both animals most OTUs belonged to Bacteroidetes and Firmicutes. Additionally, for the baby elephant a high number of Proteobacteria was detected. A metagenomic sequencing approach using Illumina technology resulted in the generation of 1.1 Gbp assembled DNA in contigs with a maximum size of 0.6 Mbp. A KEGG pathway analysis suggested high metabolic diversity regarding the use of polymers and aromatic and non-aromatic compounds. In line with the high phylogenetic diversity, a surprising and not previously described biodiversity of glycoside hydrolase (GH) genes was found. Enzymes of 84 GH families were detected. Polysaccharide utilization loci (PULs), which are found in Bacteroidetes, were highly abundant in the dataset; some of these comprised cellulase genes. Furthermore the highest coverage for GH5 and GH9 family enzymes was detected for Bacteroidetes, suggesting that bacteria of this phylum are mainly responsible for the degradation of cellulose in the Asian elephant. Altogether, this study delivers insight into the biomass conversion by one of the largest plant-fed and land-living animals."],["dc.identifier.doi","10.1371/journal.pone.0106707"],["dc.identifier.isi","000342030300036"],["dc.identifier.pmid","25208077"],["dc.identifier.purl","https://resolver.sub.uni-goettingen.de/purl?gs-1/10859"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/32360"],["dc.language.iso","en"],["dc.notes.intern","Merged from goescholar"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.relation.issn","1932-6203"],["dc.rights","CC BY 3.0"],["dc.rights.uri","https://creativecommons.org/licenses/by/3.0"],["dc.title","A Comparative Metagenome Survey of the Fecal Microbiota of a Breast- and a Plant-Fed Asian Elephant Reveals an Unexpectedly High Diversity of Glycoside Hydrolase Family Enzymes"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.version","published_version"],["dspace.entity.type","Publication"]]
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  • 2018Journal Article
    [["dc.bibliographiccitation.artnumber","16600"],["dc.bibliographiccitation.issue","1"],["dc.bibliographiccitation.journal","Scientific Reports"],["dc.bibliographiccitation.volume","8"],["dc.contributor.author","Amiri Moghaddam, Jamshid"],["dc.contributor.author","Crüsemann, Max"],["dc.contributor.author","Alanjary, Mohammad"],["dc.contributor.author","Harms, Henrik"],["dc.contributor.author","Dávila-Céspedes, Antonio"],["dc.contributor.author","Blom, Jochen"],["dc.contributor.author","Poehlein, Anja"],["dc.contributor.author","Ziemert, Nadine"],["dc.contributor.author","König, Gabriele M."],["dc.contributor.author","Schäberle, Till F."],["dc.date.accessioned","2019-07-09T11:51:03Z"],["dc.date.available","2019-07-09T11:51:03Z"],["dc.date.issued","2018"],["dc.description.abstract","Comparative genomic/metabolomic analysis is a powerful tool to disclose the potential of microbes for the biosynthesis of novel specialized metabolites. In the group of marine myxobacteria only a limited number of isolated species and sequenced genomes is so far available. However, the few compounds isolated thereof so far show interesting bioactivities and even novel chemical scaffolds; thereby indicating a huge potential for natural product discovery. In this study, all marine myxobacteria with accessible genome data (n = 5), including Haliangium ochraceum DSM 14365, Plesiocystis pacifica DSM 14875, Enhygromyxa salina DSM 15201 and the two newly sequenced species Enhygromyxa salina SWB005 and SWB007, were analyzed. All of these accessible genomes are large (~10 Mb), with a relatively small core genome and many unique coding sequences in each strain. Genome analysis revealed a high variety of biosynthetic gene clusters (BGCs) between the strains and several resistance models and essential core genes indicated the potential to biosynthesize antimicrobial molecules. Polyketides (PKs) and terpenes represented the majority of predicted specialized metabolite BGCs and contributed to the highest share between the strains. BGCs coding for non-ribosomal peptides (NRPs), PK/NRP hybrids and ribosomally synthesized and post-translationally modified peptides (RiPPs) were mostly strain specific. These results were in line with the metabolomic analysis, which revealed a high diversity of the chemical features between the strains. Only 6-11% of the metabolome was shared between all the investigated strains, which correlates to the small core genome of these bacteria (13-16% of each genome). In addition, the compound enhygrolide A, known from E. salina SWB005, was detected for the first time and structurally elucidated from Enhygromyxa salina SWB006. The here acquired data corroborate that these microorganisms represent a most promising source for the detection of novel specialized metabolites."],["dc.identifier.doi","10.1038/s41598-018-34954-y"],["dc.identifier.pmid","30413766"],["dc.identifier.purl","https://resolver.sub.uni-goettingen.de/purl?gs-1/16038"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/59865"],["dc.language.iso","en"],["dc.notes.intern","Merged from goescholar"],["dc.rights","CC BY 4.0"],["dc.rights.uri","https://creativecommons.org/licenses/by/4.0"],["dc.subject.ddc","570"],["dc.title","Analysis of the Genome and Metabolome of Marine Myxobacteria Reveals High Potential for Biosynthesis of Novel Specialized Metabolites"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.version","published_version"],["dspace.entity.type","Publication"]]
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  • 2016Journal Article
    [["dc.bibliographiccitation.artnumber","e0146832"],["dc.bibliographiccitation.issue","1"],["dc.bibliographiccitation.journal","PLoS ONE"],["dc.bibliographiccitation.volume","11"],["dc.contributor.author","Ullrich, Sophie R."],["dc.contributor.author","Poehlein, Anja"],["dc.contributor.author","Tischler, Judith S."],["dc.contributor.author","Gonzalez, Carolina"],["dc.contributor.author","Ossandon, Francisco J."],["dc.contributor.author","Daniel, Rolf"],["dc.contributor.author","Holmes, David S."],["dc.contributor.author","Schloemann, Michael"],["dc.contributor.author","Muehling, Martin"],["dc.date.accessioned","2018-11-07T10:19:13Z"],["dc.date.available","2018-11-07T10:19:13Z"],["dc.date.issued","2016"],["dc.description.abstract","Background Members of the genus \"Ferrovum\" are ubiquitously distributed in acid mine drainage (AMD) waters which are characterised by their high metal and sulfate loads. So far isolation and microbiological characterisation have only been successful for the designated type strain \"Ferrovum myxofaciens\" P3G. Thus, knowledge about physiological characteristics and the phylogeny of the genus \"Ferrovum\" is extremely scarce. Objective In order to access the wider genetic pool of the genus \"Ferrovum\" we sequenced the genome of a \"Ferrovum\"-containing mixed culture and successfully assembled the almost complete genome sequence of the novel \"Ferrovum\" strain JA12. Phylogeny and Lifestyle The genome-based phylogenetic analysis indicates that strain JA12 and the type strain represent two distinct \"Ferrovum\" species. \"Ferrovum\" strain JA12 is characterised by an unusually small genome in comparison to the type strain and other iron oxidising bacteria. The prediction of nutrient assimilation pathways suggests that \"Ferrovum\" strain JA12 maintains a chemolithoautotrophic lifestyle utilising carbon dioxide and bicarbonate, ammonium and urea, sulfate, phosphate and ferrous iron as carbon, nitrogen, sulfur, phosphorous and energy sources, respectively. Unique Metabolic Features The potential utilisation of urea by \"Ferrovum\" strain JA12 is moreover remarkable since it may furthermore represent a strategy among extreme acidophiles to cope with the acidic environment. Unlike other acidophilic chemolithoautotrophs \"Ferrovum\" strain JA12 exhibits a complete tricarboxylic acid cycle, a metabolic feature shared with the closer related neutrophilic iron oxidisers among the Betaproteobacteria including Sideroxydans lithotrophicus and Thiobacillus denitrificans. Furthermore, the absence of characteristic redox proteins involved in iron oxidation in the well-studied acidophiles Acidithiobacillus ferrooxidans (rusticyanin) and Acidithiobacillus ferrivorans (iron oxidase) indicates the existence of a modified pathway in \"Ferrovum\" strain JA12. Therefore, the results of the present study extend our understanding of the genus \"Ferrovum\" and provide a comprehensive framework for future comparative genome and metagenome studies."],["dc.identifier.doi","10.1371/journal.pone.0146832"],["dc.identifier.isi","000369527800034"],["dc.identifier.pmid","26808278"],["dc.identifier.purl","https://resolver.sub.uni-goettingen.de/purl?gs-1/12849"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/41619"],["dc.notes.intern","Merged from goescholar"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.publisher","Public Library Science"],["dc.relation.issn","1932-6203"],["dc.rights","CC BY 4.0"],["dc.rights.uri","https://creativecommons.org/licenses/by/4.0"],["dc.title","Genome Analysis of the Biotechnologically Relevant Acidophilic Iron Oxidising Strain JA12 Indicates Phylogenetic and Metabolic Diversity within the Novel Genus \"Ferrovum\""],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.status","published"],["dc.type.version","published_version"],["dspace.entity.type","Publication"]]
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  • 2018Journal Article
    [["dc.bibliographiccitation.issue","1"],["dc.bibliographiccitation.journal","Standards in Genomic Sciences"],["dc.bibliographiccitation.volume","13"],["dc.contributor.author","Bakenhus, Insa"],["dc.contributor.author","Voget, Sonja"],["dc.contributor.author","Poehlein, Anja"],["dc.contributor.author","Brinkhoff, Thorsten"],["dc.contributor.author","Daniel, Rolf"],["dc.contributor.author","Simon, Meinhard"],["dc.date.accessioned","2020-12-10T18:41:26Z"],["dc.date.available","2020-12-10T18:41:26Z"],["dc.date.issued","2018"],["dc.identifier.doi","10.1186/s40793-018-0311-5"],["dc.identifier.eissn","1944-3277"],["dc.identifier.purl","https://resolver.sub.uni-goettingen.de/purl?gs-1/15520"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/77583"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-354"],["dc.notes.intern","Merged from goescholar"],["dc.notes.intern","In goescholar not merged with http://resolver.sub.uni-goettingen.de/purl?gs-1/15175 but duplicate"],["dc.rights","CC BY 4.0"],["dc.rights.uri","https://creativecommons.org/licenses/by/4.0"],["dc.title","Genome sequence of Planktotalea frisia type strain (SH6-1T), a representative of the Roseobacter group isolated from the North Sea during a phytoplankton bloom"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]
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  • 2013Journal Article
    [["dc.bibliographiccitation.issue","3"],["dc.bibliographiccitation.journal","Genome Announcements"],["dc.bibliographiccitation.volume","1"],["dc.contributor.author","Poehlein, A."],["dc.contributor.author","Daniel, R."],["dc.contributor.author","Simeonova, D. D."],["dc.date.accessioned","2021-06-01T10:47:34Z"],["dc.date.available","2021-06-01T10:47:34Z"],["dc.date.issued","2013"],["dc.identifier.doi","10.1128/genomeA.00227-13"],["dc.identifier.purl","https://resolver.sub.uni-goettingen.de/purl?gs-1/10683"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/85645"],["dc.language.iso","en"],["dc.notes.intern","DOI-Import GROB-425"],["dc.notes.intern","Merged from goescholar"],["dc.relation.eissn","2169-8287"],["dc.rights","Goescholar"],["dc.rights.uri","https://goescholar.uni-goettingen.de/licenses"],["dc.title","Draft Genome Sequence of Desulfotignum phosphitoxidans DSM 13687 Strain FiPS-3"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.version","published_version"],["dspace.entity.type","Publication"]]
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