Kües, Ursula

[["dc.bibliographiccitation.firstpage","1079"],["dc.bibliographiccitation.issue","7"],["dc.bibliographiccitation.journal","Genes"],["dc.bibliographiccitation.volume","12"],["dc.contributor.author","Foulongne-Oriol, Marie"],["dc.contributor.author","Taskent, Ozgur"],["dc.contributor.author","Kües, Ursula"],["dc.contributor.author","Sonnenberg, Anton S. M."],["dc.contributor.author","van Peer, Arend F."],["dc.contributor.author","Giraud, Tatiana"],["dc.date.accessioned","2021-08-12T07:45:57Z"],["dc.date.available","2021-08-12T07:45:57Z"],["dc.date.issued","2021"],["dc.description.abstract","In heterothallic basidiomycete fungi, sexual compatibility is restricted by mating types, typically controlled by two loci: PR, encoding pheromone precursors and pheromone receptors, and HD, encoding two types of homeodomain transcription factors. We analysed the single mating-type locus of the commercial button mushroom variety, Agaricus bisporus var. bisporus, and of the related variety burnettii. We identified the location of the mating-type locus using genetic map and genome information, corresponding to the HD locus, the PR locus having lost its mating-type role. We found the mip1 and β-fg genes flanking the HD genes as in several Agaricomycetes, two copies of the β-fg gene, an additional HD2 copy in the reference genome of A. bisporus var. bisporus and an additional HD1 copy in the reference genome of A. bisporus var. burnettii. We detected a 140 kb-long inversion between mating types in an A. bisporus var. burnettii heterokaryon, trapping the HD genes, the mip1 gene and fragments of additional genes. The two varieties had islands of transposable elements at the mating-type locus, spanning 35 kb in the A. bisporus var. burnettii reference genome. Linkage analyses showed a region with low recombination in the mating-type locus region in the A. bisporus var. burnettii variety. We found high differentiation between β-fg alleles in both varieties, indicating an ancient event of recombination suppression, followed more recently by a suppression of recombination at the mip1 gene through the inversion in A. bisporus var. burnettii and a suppression of recombination across whole chromosomes in A. bisporus var. bisporus, constituting stepwise recombination suppression as in many other mating-type chromosomes and sex chromosomes."],["dc.description.abstract","In heterothallic basidiomycete fungi, sexual compatibility is restricted by mating types, typically controlled by two loci: PR, encoding pheromone precursors and pheromone receptors, and HD, encoding two types of homeodomain transcription factors. We analysed the single mating-type locus of the commercial button mushroom variety, Agaricus bisporus var. bisporus, and of the related variety burnettii. We identified the location of the mating-type locus using genetic map and genome information, corresponding to the HD locus, the PR locus having lost its mating-type role. We found the mip1 and β-fg genes flanking the HD genes as in several Agaricomycetes, two copies of the β-fg gene, an additional HD2 copy in the reference genome of A. bisporus var. bisporus and an additional HD1 copy in the reference genome of A. bisporus var. burnettii. We detected a 140 kb-long inversion between mating types in an A. bisporus var. burnettii heterokaryon, trapping the HD genes, the mip1 gene and fragments of additional genes. The two varieties had islands of transposable elements at the mating-type locus, spanning 35 kb in the A. bisporus var. burnettii reference genome. Linkage analyses showed a region with low recombination in the mating-type locus region in the A. bisporus var. burnettii variety. We found high differentiation between β-fg alleles in both varieties, indicating an ancient event of recombination suppression, followed more recently by a suppression of recombination at the mip1 gene through the inversion in A. bisporus var. burnettii and a suppression of recombination across whole chromosomes in A. bisporus var. bisporus, constituting stepwise recombination suppression as in many other mating-type chromosomes and sex chromosomes."],["dc.identifier.doi","10.3390/genes12071079"],["dc.identifier.pii","genes12071079"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/88584"],["dc.language.iso","en"],["dc.notes.intern","DOI Import GROB-448"],["dc.relation.eissn","2073-4425"],["dc.title","Mating-Type Locus Organization and Mating-Type Chromosome Differentiation in the Bipolar Edible Button Mushroom Agaricus bisporus"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","167"],["dc.bibliographiccitation.issue","3"],["dc.bibliographiccitation.journal","Journal of Basic Microbiology"],["dc.bibliographiccitation.lastpage","177"],["dc.bibliographiccitation.volume","44"],["dc.contributor.author","Badalyan, S. M."],["dc.contributor.author","Polak, E."],["dc.contributor.author","Hermann, R."],["dc.contributor.author","Aebi, Markus"],["dc.contributor.author","Kües, U."],["dc.date.accessioned","2018-11-07T10:52:46Z"],["dc.date.available","2018-11-07T10:52:46Z"],["dc.date.issued","2004"],["dc.description.abstract","In most filamentous basidiomycetes, clamp cells are found at the septa of dikaryotic mycelia. Clamp cell formation starts at hyphal tip cells with the development of a lateral bulge at a position slightly apical to the future septum. Relative to the growth direction of the hypha, the protrusion expands backwards into a hook-like structure. Next, the two genetically different haploid nuclei within the hyphal tip cell divide. A septum appears between clamp cell and hyphal tip cell, thereby trapping one nucleus within the clamp cell. Another septum is laid within the hypha, separating a nucleus of the other type in the newly generated subapical hyphal cell from the two different nuclei kept together in the new apical hyphal cell. Through fusion of clamp and subapical cell, the two solitary nuclei become united within the subapical hyphal compartment. In 1933, BULLER described subapical formation of a peg to which the clamp cell fuses as an additional, subsequently neglected step in this series of events. In this study, we represent evidence for subapical peg formation and its role in clamp cell fusion. Our observations potentially indicate a B mating type regulated extracellular communication between clamp and subapical hyphal cell."],["dc.identifier.doi","10.1002/jobm.200310361"],["dc.identifier.isi","000221973800001"],["dc.identifier.pmid","15162390"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/49188"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.relation.issn","0233-111X"],["dc.title","Role of peg formation in clamp cell fusion of homobasidiomycete fungi"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.subtype","original_ja"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","37"],["dc.bibliographiccitation.issue","3"],["dc.bibliographiccitation.journal","Acta Edulis Fungi"],["dc.bibliographiccitation.lastpage","50"],["dc.bibliographiccitation.volume","26"],["dc.contributor.author","Majcherczyk, Andrzej"],["dc.contributor.author","Dörnte, Bastian"],["dc.contributor.author","Subba, Shanta"],["dc.contributor.author","Zomorrodi, Mojtaba"],["dc.contributor.author","Kües, Ursula"],["dc.date.accessioned","2022-02-16T13:25:56Z"],["dc.date.available","2022-02-16T13:25:56Z"],["dc.date.issued","2019"],["dc.description.abstract","Fruiting body formation of Coprinopsis cinerea takes place at 25 ℃ under a 12 h day/12 h night regime. It starts by intense local hyphal branching with production of primary hyphal knots in the dark. A first light signal induces the transfer into the compact secondary hyphal knots. In these secondary hyphal knots, cap and stipe tissue begin to differentiate. This process underlies distinct patterns of light and dark regulated events over the following 5 days and then the mushrooms mature on the next day. To gain insight into the complex cytological processes during the cap and stipe tissue development, we isolated total proteomes from distinct primordia stages for MS/MS analysis. Between 1672 and 2663 proteins were detected in the different samples with at least two peptides at a confidence level of 99%, among which 1401 proteins were shared by all the samples. Known proteins in primordia development were identified in the samples."],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/99923"],["dc.relation.doi","10.16488/j.cnki.1005-9873.2019.03.005"],["dc.relation.orgunit","Abteilung Molekulare Holzbiotechnologie und technische Mykologie"],["dc.title","Proteomes in Primordia Development of Coprinopsis cinerea"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.subtype","original_ja"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","725"],["dc.bibliographiccitation.issue","2"],["dc.bibliographiccitation.journal","Current Trends in Biotechnology and Pharmacy"],["dc.bibliographiccitation.lastpage","731"],["dc.bibliographiccitation.volume","4"],["dc.contributor.author","Kues, Ursula"],["dc.contributor.author","Rao, K.R.S.Sambasiva"],["dc.date.accessioned","2019-07-10T08:13:48Z"],["dc.date.available","2019-07-10T08:13:48Z"],["dc.date.issued","2010"],["dc.identifier.fs","568732"],["dc.identifier.purl","https://resolver.sub.uni-goettingen.de/purl?gs-1/7479"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/61337"],["dc.language.iso","en"],["dc.notes.intern","Merged from goescholar"],["dc.relation.orgunit","Fakultät für Forstwissenschaften und Waldökologie"],["dc.rights","Goescholar"],["dc.rights.uri","https://goescholar.uni-goettingen.de/licenses"],["dc.subject.ddc","570"],["dc.title","Prof. Dr. Gopi Krishna Podila (1957-2010), an internationally renowned Indian American scientist dedicated to molecular research on trees and plant-fungal interactions - Obituary"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.version","published_version"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","957"],["dc.bibliographiccitation.issue","9"],["dc.bibliographiccitation.journal","Nature Biotechnology"],["dc.bibliographiccitation.lastpage","U10"],["dc.bibliographiccitation.volume","28"],["dc.contributor.author","Ohm, Robin A."],["dc.contributor.author","de Jong, Jan F."],["dc.contributor.author","Lugones, Luis G."],["dc.contributor.author","Aerts, Andrea L."],["dc.contributor.author","Kothe, Erika"],["dc.contributor.author","Stajich, Jason E."],["dc.contributor.author","de Vries, Ronald P."],["dc.contributor.author","Record, Eric"],["dc.contributor.author","Levasseur, Anthony"],["dc.contributor.author","Baker, Scott E."],["dc.contributor.author","Bartholomew, Kirk A."],["dc.contributor.author","Coutinho, Pedro M."],["dc.contributor.author","Erdmann, Susann"],["dc.contributor.author","Fowler, Thomas J."],["dc.contributor.author","Gathman, Allen C."],["dc.contributor.author","Lombard, Vincent"],["dc.contributor.author","Henrissat, Bernard"],["dc.contributor.author","Knabe, Nicole"],["dc.contributor.author","Kuees, Ursula"],["dc.contributor.author","Lilly, Walt W."],["dc.contributor.author","Lindquist, Erika A."],["dc.contributor.author","Lucas, Susan M."],["dc.contributor.author","Magnuson, Jon Karl"],["dc.contributor.author","Piumi, Francois"],["dc.contributor.author","Raudaskoski, Marjatta"],["dc.contributor.author","Salamov, Asaf A."],["dc.contributor.author","Schmutz, Jeremy"],["dc.contributor.author","Schwarze, Francis W. M. R."],["dc.contributor.author","vanKuyk, Patricia A."],["dc.contributor.author","Horton, J. Stephen"],["dc.contributor.author","Grigoriev, Igor V."],["dc.contributor.author","Wosten, Han A. B."],["dc.date.accessioned","2018-11-07T08:40:02Z"],["dc.date.available","2018-11-07T08:40:02Z"],["dc.date.issued","2010"],["dc.description.abstract","Much remains to be learned about the biology of mushroom-forming fungi, which are an important source of food, secondary metabolites and industrial enzymes. The wood-degrading fungus Schizophyllum commune is both a genetically tractable model for studying mushroom development and a likely source of enzymes capable of efficient degradation of lignocellulosic biomass. Comparative analyses of its 38.5-megabase genome, which encodes 13,210 predicted genes, reveal the species's unique wood-degrading machinery. One-third of the 471 genes predicted to encode transcription factors are differentially expressed during sexual development of S. commune. Whereas inactivation of one of these, fst4, prevented mushroom formation, inactivation of another, fst3, resulted in more, albeit smaller, mushrooms than in the wild-type fungus. Antisense transcripts may also have a role in the formation of fruiting bodies. Better insight into the mechanisms underlying mushroom formation should affect commercial production of mushrooms and their industrial use for producing enzymes and pharmaceuticals."],["dc.identifier.doi","10.1038/nbt.1643"],["dc.identifier.isi","000281719100022"],["dc.identifier.pmid","20622885"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/19133"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.publisher","Nature Publishing Group"],["dc.relation.issn","1546-1696"],["dc.relation.issn","1087-0156"],["dc.title","Genome sequence of the model mushroom Schizophyllum commune"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.status","published"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","184"],["dc.bibliographiccitation.issue","2"],["dc.bibliographiccitation.journal","Gene"],["dc.bibliographiccitation.lastpage","190"],["dc.bibliographiccitation.volume","535"],["dc.contributor.author","Au, Chun Hang"],["dc.contributor.author","Wong, Man Chun"],["dc.contributor.author","Bao, Dapeng"],["dc.contributor.author","Zhang, M."],["dc.contributor.author","Song, Chunyan"],["dc.contributor.author","Song, Wenhua"],["dc.contributor.author","Law, Patrick Tik Wan"],["dc.contributor.author","Kues, Ursula"],["dc.contributor.author","Kwan, Hoi Shan"],["dc.date.accessioned","2018-11-07T09:43:48Z"],["dc.date.available","2018-11-07T09:43:48Z"],["dc.date.issued","2014"],["dc.description.abstract","The Shiitake mushroom, Lentinula edodes (Berk.) Pegler is a tetrapolar basidiomycete with two unlinked mating-type loci, commonly called the A and B loci. Identifying the mating-types in shiitake is important for enhancing the breeding and cultivation of this economically-important edible mushroom. Here, we identified the A mating-type locus from the first draft genome sequence of L. edodes and characterized multiple alleles from different monokaryotic strains. Two intron-length polymorphism markers were developed to facilitate rapid molecular determination of A mating-type. L. edodes sequences were compared with those of known tetrapolar and bipolar basidiomycete species. The A mating-type genes are conserved at the homeodomain region across the order Agaricales. However, we observed unique genomic organization of the locus in L edodes which exhibits atypical gene order and multiple repetitive elements around its A locus. To our knowledge, this is the first known exception among Homobasidiomycetes, in which the mitochondrial intermediate peptidase (mip) gene is not closely linked to A locus. (C) 2013 Elsevier B.V. All rights reserved."],["dc.identifier.doi","10.1016/j.gene.2013.11.036"],["dc.identifier.isi","000331672200015"],["dc.identifier.pmid","24295887"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/34259"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.publisher","Elsevier Science Bv"],["dc.relation.issn","1879-0038"],["dc.relation.issn","0378-1119"],["dc.title","The genetic structure of the A mating-type locus of Lentinula edodes"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.status","published"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","9"],["dc.bibliographiccitation.issue","1"],["dc.bibliographiccitation.journal","Current Genetics"],["dc.bibliographiccitation.lastpage","18"],["dc.bibliographiccitation.volume","45"],["dc.contributor.author","Hoegger, Patrick J."],["dc.contributor.author","Navarro-Gonzaléz, Monica"],["dc.contributor.author","Kilaru, Sreedhar"],["dc.contributor.author","Hoffmann, Mathias"],["dc.contributor.author","Westbrook, E. D."],["dc.contributor.author","Kües, Ursula"],["dc.date.accessioned","2018-11-07T10:51:21Z"],["dc.date.available","2018-11-07T10:51:21Z"],["dc.date.issued","2004"],["dc.description.abstract","In this study, we isolated and sequenced eight non-allelic laccase genes from Coprinopsis cinerea (Coprinus cinereus) homokaryon AmutBmut. These eight genes represent the largest laccase gene family identified so far in a single haploid fungal genome. We analyzed the phylogenetic relationships between these genes by intron positions, amino acid sequence conservation and similarities in promoter sequences. All deduced protein products have the laccase signature sequences L1-L4, the typical conserved cysteine and the ten histidine residues which are ligands in the two laccase copper-binding centers, T1 and T2/T3. Proteins Lcc2 and Lcc3 of Coprinopsis cinerea are most similar to the acidic, membrane-associated laccase CLAC2 from Coprinellus congregatus implicated in neutralization of acidic medium. All other laccases from the saprophyte Coprinopsis cinerea, including the well described enzyme Lcc1, form a cluster separate from these three enzymes and from various laccases of wood-rotting and plant-pathogenic basidiomycetes."],["dc.identifier.doi","10.1007/s00294-003-0452-x"],["dc.identifier.isi","000188384500002"],["dc.identifier.pmid","14600788"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/48872"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.relation.issn","0172-8083"],["dc.title","The laccase gene family in Coprinopsis cinerea (Coprinus cinereus)"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.subtype","original_ja"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","1877"],["dc.bibliographiccitation.issue","3"],["dc.bibliographiccitation.journal","Genetics"],["dc.bibliographiccitation.lastpage","1891"],["dc.bibliographiccitation.volume","172"],["dc.contributor.author","James, T. Y."],["dc.contributor.author","Srivilai, P."],["dc.contributor.author","Kües, Ursula"],["dc.contributor.author","Vilgalys, R."],["dc.date.accessioned","2018-11-07T10:12:32Z"],["dc.date.available","2018-11-07T10:12:32Z"],["dc.date.issued","2006"],["dc.description.abstract","Mating incompatibility in mushroom fungi is controlled by the mating-type loci. In tetrapolar species, two unlinked mating-type loci exist. (A and B), whereas in bipolar species there is only One locus. The A and B mating-type loci encode homeodomain transcription factors and pheromones and pheromone receptors, respectively. Most mushroom species have a tetrapolar mating system, but numerous transitions to bipolar mating systems have occurred. Here we determined the genes controlling mating type in the bipolar mushroom Corpinellus disseminatus. Through positional cloning and degenerate PCR, we sequenced both the transcription factor and pheromone receptor mating-type gene homologs from C disseminatus. Only the transcription factor genes segregate with mating type, discounting the hypothesis of genetic linkage between the A and B mating-type loci its the causal origin of bipolar mating behavior. The mating-type locus of C. disseminatus is similar to the A mating-type locus of the model species Coprinopsis cinerea and encodes two tightly linked pairs of homeodomain transcription Factor genes. When transformed into C. cinerea, the C. disseminatus A and B homologs elicited sexual reactions like native mating-type genes. Although mating type in C. disseminatus is controlled by only the transcription factor genes, cellular functions appear to be conserved for both groups of genes."],["dc.identifier.doi","10.1534/genetics.105.051128"],["dc.identifier.isi","000236668100043"],["dc.identifier.pmid","16461425"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/40257"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.publisher","Genetics"],["dc.relation.issn","0016-6731"],["dc.title","Evolution of the bipolar mating system of the mushroom Coprinellus disseminatus from its tetrapolar ancestors involves loss of mating-type-specific pheromone receptor function"],["dc.type","journal_article"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.status","published"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.journal","Mycoses"],["dc.bibliographiccitation.volume","58"],["dc.contributor.author","Giessler, A."],["dc.contributor.author","Kuees, Ursula"],["dc.date.accessioned","2018-11-07T09:51:55Z"],["dc.date.available","2018-11-07T09:51:55Z"],["dc.date.issued","2015"],["dc.format.extent","26"],["dc.identifier.isi","000367475500078"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/36008"],["dc.notes.status","zu prüfen"],["dc.notes.submitter","Najko"],["dc.publisher","Wiley-blackwell"],["dc.publisher.place","Hoboken"],["dc.relation.issn","1439-0507"],["dc.relation.issn","0933-7407"],["dc.title","The definition of Psilocybe cyanescens Wakef. sensu stricto"],["dc.type","conference_abstract"],["dc.type.internalPublication","yes"],["dc.type.peerReviewed","yes"],["dc.type.status","published"],["dspace.entity.type","Publication"]]

[["dc.bibliographiccitation.firstpage","297"],["dc.bibliographiccitation.lastpage","346"],["dc.contributor.author","Kloeser, L."],["dc.contributor.author","Kües, Ursula"],["dc.contributor.author","Schöpper, C."],["dc.contributor.author","Hosseinkhani, H."],["dc.contributor.author","Schütze, S."],["dc.contributor.author","Dantz, S."],["dc.contributor.author","Malik, I."],["dc.contributor.author","Vos, H."],["dc.contributor.author","Bartholme, M."],["dc.contributor.author","Müller, C."],["dc.contributor.author","Polle, Andrea"],["dc.contributor.author","Kharazipour, Alireza"],["dc.contributor.editor","Kües, Ursula"],["dc.date.accessioned","2017-09-07T11:49:55Z"],["dc.date.available","2017-09-07T11:49:55Z"],["dc.date.issued","2007"],["dc.identifier.gro","3149760"],["dc.identifier.uri","https://resolver.sub.uni-goettingen.de/purl?gro-2/6457"],["dc.notes.status","public"],["dc.notes.submitter","chake"],["dc.publisher","Georg-August-Universität Göttingen"],["dc.publisher.place","Göttingen"],["dc.relation.isbn","978-3-940344-11-3"],["dc.relation.ispartof","Wood Production, Wood Technology, and Biotechnological Impacts"],["dc.title","Boards and Conventional Adhesives"],["dc.type","book_chapter"],["dc.type.internalPublication","unknown"],["dc.type.peerReviewed","no"],["dspace.entity.type","Publication"]]